PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Sme2.5_00085.1_g00016.1

Organism

Solanum melongena

Taxonomic ID

4111

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum

Family

bZIP

Protein Properties

Length: 325aa MW: 36542.2 Da PI: 7.3489

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Sme2.5_00085.1_g00016.1	genome	EGD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	52.4	1.2e-16	255	299	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++Lk + + Sme2.5_00085.1_g00016.1 255 RRQKRMIKNRESAARSRARKQAYTHELENKVSWLEEENERLK-RQK 299 79***************************************9.333 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.3E-12	251	319	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.369	253	298	IPR004827	Basic-leucine zipper domain
CDD	cd14707	4.54E-23	255	300	No hit	No description
Gene3D	G3DSA:1.20.5.170	6.3E-14	255	298	No hit	No description
Pfam	PF00170	1.2E-13	255	298	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.19E-11	255	300	No hit	No description
PROSITE pattern	PS00036	0	258	273	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 325 aa Download sequence Send to blast
MVTQGRGEAK ANALAGQGSL YSLTLDEVRN QLRHCGKPLH SMNLDEFVKT VWTIEASQEL 60 GANDYGAVQH GTSSITMSRD LSKKTVDEVW QDIQQEVNRD SVDKRSQERQ LTLGEITLED 120 FLVKAGVIAE STQGNRILGS MSLIQQAQPP HYQIPTMQQV PEQQHQQQQQ QQNILAVFMP 180 GHPIQQPLPV VANPIMDATY PETQVTMSPA HIMGTLSDTQ TLLSPAHVMG TLSDTQTSGR 240 KRVARDAVAE NSVERRQKRM IKNRESAARS RARKQAYTHE LENKVSWLEE ENERLKRQKE 300 IENILPSVPP PEPKYQLRRT SSGPI

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	HG975449	2e-99	HG975449.1 Solanum pennellii chromosome ch10, complete genome.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006364744.1	1e-176	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_006364745.1	1e-176	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_006364746.1	1e-176	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_006364747.1	1e-176	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_006364748.1	1e-176	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_015159583.1	1e-176	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	2e-90	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	M1AAW1	1e-175	M1AAW1_SOLTU; Uncharacterized protein
STRING	PGSC0003DMT400018574	1e-176	(Solanum tuberosum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA3334	24	48

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	8e-92	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]