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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sme2.5_00013.1_g00022.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family |
ERF |
Protein Properties |
Length: 337aa MW: 38010.4 Da PI: 6.0655 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sme2.5_00013.1_g00022.1 | genome | EGD | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.9 | 2.9e-19 | 127 | 177 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+GVr+++ +g+WvAeIr p + r+r++lg+++ ae Aa a+++a+ kl+ge
Sme2.5_00013.1_g00022.1 127 LYRGVRQRH-WGKWVAEIRLPQN---RTRVWLGTYDNAEAAAYAYDRAAYKLRGE 177
69******9.**********954...5**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010200 | Biological Process | response to chitin |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 337 aa
Download sequence Send
to blast |
MSYTDDEAAR IRSSLSQILL TSSTNTIDSI FSHCQEPDNQ VSTTSPVLEP LGSSVYLRQK 60 DLLQNFWEQN RTNITTPPQT PLHESIYSQK FWEQNPTNVT IPTTSTQIPF QESLYSQRYV 120 SPTKKTLYRG VRQRHWGKWV AEIRLPQNRT RVWLGTYDNA EAAAYAYDRA AYKLRGEYAR 180 LNFPNLRDPS ELGFGESAKM NALKNSVDAK IQAICQRVKR ERTKKGAKKF VERVKKDAKH 240 VDLDSPSCSS SLVGSESWSL SDVISQSSSD DGFLKSDNSP CSVLGDCPMG SENDDDSYFT 300 GITHQFERPM MESELEGCSL AGMPSFDPEL IWAVLAN
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