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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sevir.9G521100.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
ERF |
Protein Properties |
Length: 327aa MW: 35143.8 Da PI: 6.0927 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.9G521100.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 60.4 | 4.1e-19 | 99 | 148 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+++G+r+++ +g+W+AeIrdp + +r++lg+f+tae+Aa+a++ +++l+g
Sevir.9G521100.1.p 99 HFRGIRQRP-WGKWAAEIRDPH----KgTRVWLGTFDTAEDAARAYDVEARRLRG 148
69*******.**********72....35*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 327 aa
Download sequence Send
to blast |
MCGGAILTEL IPSPRRAASK PVTAGHLWSA GSNSKKAGNG SDKGHHHADI DDFEAAFEDF 60 DDEFDEEVED HHFVFSAKSA FSPAHGGRAA SQKKRGRRHF RGIRQRPWGK WAAEIRDPHK 120 GTRVWLGTFD TAEDAARAYD VEARRLRGSK AKVNFPAAGA RPRRRGNPRA APKPQHHHAA 180 AAEQPALLAG EKKQEEIAVK PEITVSFDVD GFFNMTFPAF PAAPLAMESS FTGSTEPESG 240 SPAKKPRYDN ESSGGMSSGG GSTLELADEL AFDPFTLLQL PYSGGYESLD GLFAVDAAQD 300 VNGVNNGMDG VSLWSFDDFP ADSAVF*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT039300 | 1e-125 | BT039300.1 Zea mays full-length cDNA clone ZM_BFc0004M21 mRNA, complete cds. |
GenBank | EU970244 | 1e-125 | EU970244.1 Zea mays clone 342610 root abundant factor mRNA, complete cds. |
GenBank | KJ726938 | 1e-125 | KJ726938.1 Zea mays clone pUT3484 AP2-EREBP transcription factor (EREB180) mRNA, partial cds. |