 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sevir.9G311400.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
| Family |
WRKY |
| Protein Properties |
Length: 422aa MW: 45224.5 Da PI: 6.607 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sevir.9G311400.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 97.1 | 1.1e-30 | 179 | 237 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY+++Hnh+
Sevir.9G311400.1.p 179 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPSMLVITYTSDHNHP 237
699************************998****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 422 aa
Download sequence Send
to blast |
MCDFFWLSPA DQGDLSDVVR ASLQQQPPSH HRLPLGTPAP AVRSHGSLGS HHLPEEEEEL 60
LVHGNGGMGL MVSSSIAGCD RALYPQHHHP EAEGLLIPQQ LMSSSSFVVE LREDDVANTP 120
AVLDELGLED MAMAPHPDHA PSIKRRKSQT KKVVCIPAPV APPPGVGGRP STSGEVVPSD 180
LWAWRKYGQK PIKGSPYPRG YYRCSSSKGC SARKQVERSR TDPSMLVITY TSDHNHPWPT 240
HRNALAGSIR PAAAATSSSS SPSAKQSHHH QRRSAAAAAV TDPTPPHRHA SDVVVADNST 300
TPAGSITASI HNHQLLLKKE VLDMDSLEPA QEDAAADHDL VVGGMIADMD GALNVLCASS 360
FHSKKQQQQH ATADHLERLP EEEDKRLLLD RDPFSFSFLD WVGASFGVAG EAAAANKGGY 420
S*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AC018727 | 1e-80 | AC018727.10 Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete sequence. |
| GenBank | AP014966 | 1e-80 | AP014966.1 Oryza sativa Japonica Group DNA, chromosome 10, cultivar: Nipponbare, complete sequence. |
| GenBank | CP012618 | 1e-80 | CP012618.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 10 sequence. |
| GenBank | KC954610 | 1e-80 | KC954610.1 Oryza sativa Japonica Group cultivar Dongjin WRKY2 mRNA, complete cds. |
