 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sevir.9G204900.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
| Family |
Dof |
| Protein Properties |
Length: 251aa MW: 25159.3 Da PI: 9.2727 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sevir.9G204900.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 103.5 | 1.2e-32 | 81 | 135 | 5 | 59 |
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59
++cprC+s+ntkfCyynnys +qPry+CkaCrr+Wt+GG+lr+vPvGggr++++
Sevir.9G204900.1.p 81 PRQCPRCQSANTKFCYYNNYSRTQPRYLCKACRRHWTEGGTLRDVPVGGGRKNRR 135
679**********************************************976554 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 251 aa
Download sequence Send
to blast |
MPSSFLASAS SSASSPLSYL IPAASRPPPP PLVMGQGYSV DGLAGVPTGG VVVDATSAAA 60
VAPPRPGARN PGHPPLPRPP PRQCPRCQSA NTKFCYYNNY SRTQPRYLCK ACRRHWTEGG 120
TLRDVPVGGG RKNRRGGSKA GAAAAKASAS TSAAAAAATQ GGSVAVGADT FPDLLRQLMQ 180
FQPTALAGGG YAIDLSAWQQ MAAATAPPQG AGDVSALGGA AAAAAEANCG ALQYWAGWQP 240
DDMPGLDGPC *
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KJ727985 | 1e-125 | KJ727985.1 Zea mays clone pUT6101 C2C2-DOF transcription factor (DOF13) mRNA, partial cds. |
