 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Sevir.9G163500.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
| Family |
NAC |
| Protein Properties |
Length: 334aa MW: 36686.6 Da PI: 7.6599 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sevir.9G163500.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 180.2 | 5.4e-56 | 5 | 130 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lppGfrFhPtdeel+++yL++kv++ + + ++i++vd++k+ePwdLp+k++ +ekewyfFs rd+ky+tg r+nrat+sgyWk+tgkdke
Sevir.9G163500.1.p 5 LPPGFRFHPTDEELITYYLTRKVSDFAFAT-RAIADVDLNKCEPWDLPSKASMGEKEWYFFSMRDRKYPTGIRTNRATDSGYWKTTGKDKE 94
79*************************999.89***************999999************************************* PP
NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+++ g lvg+kktLvfy+grapkgekt+Wvmheyrl
Sevir.9G163500.1.p 95 IFH-CGMLVGMKKTLVFYRGRAPKGEKTSWVMHEYRL 130
***.99*****************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 334 aa
Download sequence Send
to blast |
MEEGLPPGFR FHPTDEELIT YYLTRKVSDF AFATRAIADV DLNKCEPWDL PSKASMGEKE 60
WYFFSMRDRK YPTGIRTNRA TDSGYWKTTG KDKEIFHCGM LVGMKKTLVF YRGRAPKGEK 120
TSWVMHEYRL QNKFPYKPNK EEWVVCRVFK KSQIIKIRPP QGSPTMDDSL GHDANASLSE 180
LGELDVSSIL GGFAPAPAAH TSSSSPGGAL HHGAGGESFG HTRVDMSAYM SWMAAANQGA 240
AAAAAAAMLP WATTTTPGLF GNVFAPNQHQ LVQKPLPFAG QPRDLGGFVG NAGSEHAMFA 300
SSLAKVEMEC DQQQPPPPPE QQLAMNESTW RAF*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 9e-57 | 5 | 151 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 9e-57 | 5 | 151 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 9e-57 | 5 | 151 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 9e-57 | 5 | 151 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-56 | 5 | 151 | 20 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 1e-56 | 5 | 151 | 20 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 1e-56 | 5 | 151 | 20 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 1e-56 | 5 | 151 | 20 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 1e-56 | 5 | 151 | 20 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 1e-56 | 5 | 151 | 20 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 1e-56 | 5 | 151 | 20 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 1e-56 | 5 | 151 | 20 | 168 | NAC domain-containing protein 19 |
| 4dul_A | 9e-57 | 5 | 151 | 17 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 9e-57 | 5 | 151 | 17 | 165 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK363171 | 0.0 | AK363171.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2013D22. |
