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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.9G161700.3.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
WRKY |
Protein Properties |
Length: 349aa MW: 37474.2 Da PI: 10.4402 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.9G161700.3.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 98.4 | 4.5e-31 | 282 | 339 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +d +++++tYegeHnh+
Sevir.9G161700.3.p 282 DEYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERCVDDSSMLIVTYEGEHNHT 339
9*************************988****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0005516 | Molecular Function | calmodulin binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 349 aa
Download sequence Send
to blast |
MEEVEEANRA AVESCHRVLA LLSQPHDPAQ ARSIALGTDE ACAKFRKVVS LLSNGGGAGA 60 GGEAGPSGTS RSHPRAKVVS RRQNPGFLTQ KGFLDSNTPV VVLNSAHPSP SSAQVYPRTG 120 ALDAQSIHPL GGPPKLVQPL SAHFQFSNVS SRYQFPHQQQ QKLQAEMFKR SNSGINLKFD 180 STSGTGTMSS ARSFLSSLSM DGSVASLDGK SSSFHLIGGP AMSDPVNAQQ APRRRCTGRG 240 EDGTGKCAVT GRCHCSKRRK LRVKRSIKVP AISNKIADIP PDEYSWRKYG QKPIKGSPHP 300 RGYYKCSSVR GCPARKHVER CVDDSSMLIV TYEGEHNHTR MPTQSTQA*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |