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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.9G082800.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
WRKY |
Protein Properties |
Length: 426aa MW: 45109.8 Da PI: 6.4279 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.9G082800.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 94.5 | 7.6e-30 | 191 | 247 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+Dgy+WrKYGqK+ k++e prsYY+Ct gCpvkk vers d+ ++eitY+g+Hnh+
Sevir.9G082800.1.p 191 KDGYSWRKYGQKQLKDAESPRSYYKCTRDGCPVKKVVERSF-DGFITEITYKGRHNHP 247
8****************************************.***************8 PP
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2 | WRKY | 103.5 | 1.2e-32 | 323 | 381 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg++ prsYY+Ct +C+v+k++er+++dp++v +tY+g+Hnh+
Sevir.9G082800.1.p 323 LDDGYRWRKYGQKVVKGNPRPRSYYKCTADNCNVRKQIERASTDPRCVLTTYTGRHNHD 381
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 426 aa
Download sequence Send
to blast |
MDDRRGRGDA MRQRPFASAA QEQERVFDGG GGAGHGPAFG GDFDQGSSLM ALLGAGGVSS 60 SQPSLPTWGV EEVTAASAIN LVPQSFSMAN YAPPVPSYQQ PTSFAPSPLG GRMDPYPPYL 120 LSDPPPQWPP PRSTAAAASS LPPQNFAVLL PRYDQDMQQL RAAAFFGAGS SQSQAALPLL 180 PPAPAIEQPA KDGYSWRKYG QKQLKDAESP RSYYKCTRDG CPVKKVVERS FDGFITEITY 240 KGRHNHPRPQ ERGHAAGGND ALAAAAEDDV EGLSDDDDDA LHEDDLDGGH GAPGMGADGG 300 EGGQRVVKKP KIIIQTPSEV DLLDDGYRWR KYGQKVVKGN PRPRSYYKCT ADNCNVRKQI 360 ERASTDPRCV LTTYTGRHNH DPPGRGNEAP ATAAAAAGGH PAPSAGGSGT FQQTGGGARQ 420 LKEES*
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Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AK363803 | 2e-78 | AK363803.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2019A07. |