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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.9G082200.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
bHLH |
Protein Properties |
Length: 402aa MW: 42060.8 Da PI: 8.8383 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.9G082200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 11.2 | 0.0007 | 166 | 211 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
a n+r r R +++ +++ L++l+ + +K + a++L +A YI+ L
Sevir.9G082200.1.p 166 ATNKRPRVRKEKLGERIIALQQLVSPF-----GKSDTASVLHEALGYIRFL 211
679**********************98.....8****************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 402 aa
Download sequence Send
to blast |
MVKEEEIVAE AGGRGYMDLL GLGGEDYLLC MSPSSYFSSS VVSTATTTSA TPAAASSPTC 60 SSYLDLAPAY HQMLSFAGQG QYHGGDGIFG LQYYGGDQAI PMAVPVPQKS SPTTECSSSI 120 SSMSSSPPAT TVSAISSPKP QAFKKKGSRS SDQRKAAPAA VATTAATNKR PRVRKEKLGE 180 RIIALQQLVS PFGKSDTASV LHEALGYIRF LHDQVQIHTN KRGAPCLVSC HAYVSQCSNV 240 CILCVYAPAC TVMAAGLVAG SLVHALLGTY WLWSLFFVSG SELAVHAAAP AGLGARSAVL 300 VLCCCIVAGA GERGRDGGGA AAADERPEEP GAVPGADRVH GACRRRRSRP RPRQRRRPLV 360 RGGGDGEGGR GEQGCCCCRS AAWWWSWSPR APGLADRPRH T*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 343 | 357 | RRRRSRPRPRQRRRP |
2 | 346 | 356 | RSRPRPRQRRR |