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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.8G130100.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
WRKY |
Protein Properties |
Length: 208aa MW: 22754 Da PI: 9.9327 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.8G130100.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 105.6 | 2.6e-33 | 116 | 174 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK vk+++fprsYYrCt++gC+vkk+v+r ++d+ vv++tYeg+H+h+
Sevir.8G130100.1.p 116 LDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLSRDEGVVVTTYEGTHTHP 174
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0000122 | Biological Process | negative regulation of transcription from RNA polymerase II promoter |
GO:0010055 | Biological Process | atrichoblast differentiation |
GO:0032107 | Biological Process | regulation of response to nutrient levels |
GO:0043620 | Biological Process | regulation of DNA-templated transcription in response to stress |
GO:0048527 | Biological Process | lateral root development |
GO:0005634 | Cellular Component | nucleus |
GO:0001046 | Molecular Function | core promoter sequence-specific DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 208 aa
Download sequence Send
to blast |
MENYHMLFGT TPTAAQPSSS TSNSYNFLAT AGGGTSSLMR DHDRGQPGHS FLAELSNSSK 60 DGGASPPAAA GGRGESSAGP AAAGGEVDRP SGKRKGEKKE RRPRYAFQTR SQVDILDDGY 120 RWRKYGQKAV KNNKFPRSYY RCTHQGCNVK KQVQRLSRDE GVVVTTYEGT HTHPIEKSND 180 NFEHILTQMQ IYSGMGSNFS SNHNMFH*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ728200 | 1e-131 | KJ728200.1 Zea mays clone pUT6475 WRKY transcription factor (WRKY108) mRNA, partial cds. |