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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sevir.8G011600.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
WRKY |
Protein Properties |
Length: 271aa MW: 30921.9 Da PI: 6.442 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.8G011600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 59.3 | 7.7e-19 | 123 | 186 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTT....EEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpk....vveitYegeHnhe 59
Dgy+WrKYGqK + +++++rsYYrC+ + gC ++k v+++++d++ ++++ Y g+H ++
Sevir.8G011600.1.p 123 DGYQWRKYGQKWISKAKHSRSYYRCANSkgqGCLATKTVQQKETDGSgtvrLFDVDYYGQHICK 186
9*************************988889************9853333789*******987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 271 aa
Download sequence Send
to blast |
MNILESSTHS SCQVAINEIE HQRALMMDLH DLILPILDTH SGQAKLVQQL FQDIFNSSSK 60 VISFLELGDN SEKQANLIRY KRKHGKNNME SHILEEETKE IGNKRRKNAE HIGSVVTQAP 120 YFDGYQWRKY GQKWISKAKH SRSYYRCANS KGQGCLATKT VQQKETDGSG TVRLFDVDYY 180 GQHICKKDGI IHPYVVETTC HSVPIVNHNQ SSISTFVNND VHGIQDENYE NLFMVPDMPE 240 CLKDLTDTEM ERALELTCMN LPLISEDIWA *
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