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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Sevir.8G007400.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
| Family |
NAC |
| Protein Properties |
Length: 386aa MW: 41982 Da PI: 8.9118 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sevir.8G007400.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 171.6 | 2.4e-53 | 16 | 149 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lppGfrFhPtdee+++ yL +k+ + +++ ++i evd++k+ePwdLp+k+k +ekew+fF+++d ky+tg r+nratk+gyWkatgkd++
Sevir.8G007400.1.p 16 LPPGFRFHPTDEEVITSYLLQKLLNPSFDP-QAIGEVDLNKCEPWDLPSKAKMGEKEWFFFCHKDMKYPTGMRTNRATKEGYWKATGKDRD 105
79*************************999.88***************99999************************************** PP
NAM 92 vlsk......kgelvglkktLvfykgrapkgektdWvmheyrle 129
+++ ++elvg+kktLvfy grap+g+kt+Wvmhe+rle
Sevir.8G007400.1.p 106 IFKPaaaggaGRELVGMKKTLVFYMGRAPRGSKTNWVMHEFRLE 149
***99998888888***************************985 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 386 aa
Download sequence Send
to blast |
MVERSVKSEH GGGLFLPPGF RFHPTDEEVI TSYLLQKLLN PSFDPQAIGE VDLNKCEPWD 60
LPSKAKMGEK EWFFFCHKDM KYPTGMRTNR ATKEGYWKAT GKDRDIFKPA AAGGAGRELV 120
GMKKTLVFYM GRAPRGSKTN WVMHEFRLEG KSRHNNSKLR FNPKDEWVVC KVHHKNGEAK 180
KPAEEYSAGT PNVSSVISDD AGEGDDHFLD SMINSMYFNS AGSSLPSTTN VNAAAPHNAD 240
YNPISCTVNP ISSTFLTTAS TTQQASAICT RSSLWPNSAA PRSSSSGYSS SWNMLHADHN 300
QAMGSYNLHH QAMVAKALGG VTSPNFAGVL PSSSVTAGFL QQNSVCMPQQ KLGNYRESYA 360
TNLTSSSAST TGPAAKNLGD GLVRY*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 3swm_A | 1e-53 | 14 | 181 | 18 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 1e-53 | 14 | 181 | 18 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 1e-53 | 14 | 181 | 18 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 1e-53 | 14 | 181 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 1e-53 | 14 | 181 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 1e-53 | 14 | 181 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 1e-53 | 14 | 181 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 1e-53 | 14 | 181 | 18 | 174 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in stress response (By similarity). Binds to DNA-specific sequences of CLPD1 and OAT promoters in vitro (PubMed:18813954). {ECO:0000250|UniProtKB:Q7F2L3, ECO:0000269|PubMed:18813954}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by salt and cold stresses. {ECO:0000269|PubMed:18813954}. |
