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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Sevir.7G332800.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
| Family |
AP2 |
| Protein Properties |
Length: 292aa MW: 31073.6 Da PI: 8.589 |
| Description |
AP2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sevir.7G332800.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 46 | 1.3e-14 | 93 | 152 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55
s+++GV++ k++g+++A+++d s+ g ++ k+++lg++ t+e+Aaka++ a++k++g
Sevir.7G332800.1.p 93 SRFHGVTRLKWSGKYEAHLWDnTSQvEGrkRKgKHVYLGSYVTEEQAAKAHDLAALKYWG 152
789******************666696675336*************************98 PP
|
| 2 | AP2 | 53 | 8.7e-17 | 197 | 250 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpse.ngkr.krfslgkfgtaeeAakaaiaarkkleg 55
s y+GV+++k +g+W A+I e + k ++lg+f+t+eeAa+a++ a+ +l+g
Sevir.7G332800.1.p 197 SSYRGVTRRK-DGKWQARIGRIGEsR--DtKDIYLGTFDTEEEAAEAYDIAAIELRG 250
67*****999.9******99953323..36*************************97 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 292 aa
Download sequence Send
to blast |
MATVQPQSPA GPAPSTPQKG RHGDAPNPPA ASGEPPAAAG PGGEIAALDK QLAVGGGGGG 60
EERKPGGGAS AGAGGGGKLV AEAMRKYAAP RSSRFHGVTR LKWSGKYEAH LWDNTSQVEG 120
RKRKGKHVYL GSYVTEEQAA KAHDLAALKY WGTGPNTKLN FSISDYEKEI EIMNTMSQDE 180
FVAYIRRQSS CFSRGTSSYR GVTRRKDGKW QARIGRIGES RDTKDIYLGT FDTEEEAAEA 240
YDIAAIELRG VHAVTNFDIS NYCEDGLRKL EGPSEVAKLE GPSEVMKLAG Q*
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| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
