 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sevir.7G319000.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
| Family |
AP2 |
| Protein Properties |
Length: 508aa MW: 56096 Da PI: 6.0709 |
| Description |
AP2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sevir.7G319000.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | AP2 | 51.3 | 2.9e-16 | 172 | 232 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse...ng..krkrfslgkfgtaeeAakaaiaarkkleg 55
s y+GV++++++gr++A+++d + ++ k ++++lg ++t+e Aa+a++ a++k++g
Sevir.7G319000.1.p 172 SVYRGVTRHRWTGRFEAHLWDkHCLtsiQNkkKGRQVYLGAYDTEEAAARAYDLAALKYWG 232
78*******************9988888445455*************************98 PP
|
| 2 | AP2 | 56.6 | 6.3e-18 | 275 | 327 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
s+y+GV +++ +grW+A+I + g +k+ +lg+f+t eeAaka++ a+ +++g+
Sevir.7G319000.1.p 275 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTFDTQEEAAKAYDLAAIEYRGA 327
89****99**********99966...3.6*************************995 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006110 | Biological Process | regulation of glycolytic process |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009744 | Biological Process | response to sucrose |
| GO:0019432 | Biological Process | triglyceride biosynthetic process |
| GO:1901959 | Biological Process | positive regulation of cutin biosynthetic process |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 508 aa
Download sequence Send
to blast |
MHCNAGLRGA GCHLDDKQTG CHVVLAATEI LTKTPPLPLV LYKNPCSVHL AGKSFTCTGN 60
ATTIILHQGA SDEGASRRTT RKRRRSEKRH THMERSPRPS PPPVSSPPSS SSSSSISTEE 120
IPIPPRKRRA RPTQAEGGAP DKSKRPRKEA VRHRHSKEDP NATAASAGKR SSVYRGVTRH 180
RWTGRFEAHL WDKHCLTSIQ NKKKGRQVYL GAYDTEEAAA RAYDLAALKY WGPETVLNFP 240
AEDYSNEMSE MEGVSREEYL ASLRRRSSGF SRGVSKYRGV ARHHHNGRWE ARIGRVFGNK 300
YLYLGTFDTQ EEAAKAYDLA AIEYRGANAV TNFDISCYLD HPXLLAQLQQ DPQVVPALNQ 360
EPQPDQSETT VQESDSSEEK TPDNNAEPXD NAEPDANAEP XNNAEPLTVD DSIEESLWSP 420
CMDYELDTMS RSNFGSSINL NEWFTDADLD SNIGCLFDGC SXVDEGSKDG VGLADFSLFE 480
EGDGKLKDVI SDIEEGIHPP TMISVCN*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 80 | 84 | RKRRR |
| 2 | 80 | 85 | RKRRRS |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BT038184 | 0.0 | BT038184.1 Zea mays full-length cDNA clone ZM_BFb0216H15 mRNA, complete cds. |
| GenBank | KJ726910 | 0.0 | KJ726910.1 Zea mays clone pUT3455 AP2-EREBP transcription factor (EREB85) mRNA, partial cds. |
