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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Sevir.7G317300.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
| Family |
NAC |
| Protein Properties |
Length: 367aa MW: 40179.1 Da PI: 8.4382 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sevir.7G317300.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 170.9 | 3.9e-53 | 16 | 149 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lppGfrFhPtdee+++ yL +k + +++ ++i evd++k+ePwdLp+k+k +ekew+fF+++d ky+tg r+nratk+gyWkatgkd+e
Sevir.7G317300.1.p 16 LPPGFRFHPTDEEVITSYLLEKFLNPSFDP-QAIGEVDLNKCEPWDLPSKAKMGEKEWFFFCHKDMKYPTGMRTNRATKEGYWKATGKDRE 105
79*************************999.88***************99999************************************** PP
NAM 92 vlsk......kgelvglkktLvfykgrapkgektdWvmheyrle 129
+++ ++elvg+kktLvfy grap+g+kt+Wvmhe+rle
Sevir.7G317300.1.p 106 IFKPaaaagaGRELVGMKKTLVFYMGRAPRGSKTNWVMHEFRLE 149
***98888888888***************************985 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 367 aa
Download sequence Send
to blast |
MVERSVKSEH GGGLFLPPGF RFHPTDEEVI TSYLLEKFLN PSFDPQAIGE VDLNKCEPWD 60
LPSKAKMGEK EWFFFCHKDM KYPTGMRTNR ATKEGYWKAT GKDREIFKPA AAAGAGRELV 120
GMKKTLVFYM GRAPRGSKTN WVMHEFRLEG KSRHNNTKLR FNPKDEWVVC KVHHKNGEAK 180
KPAEEYSAST PNVSSVISDD AGEGDDFLDS MINPMYFNNA GSLPTSTTTV NAAPPQNADY 240
AISSTAAGAT TGTTSSFVNL PNYGFNDTTS INNLHQVALA NSAAPRSSFS SSWNMLHADH 300
NQAMGSYNLH HQAMVAKALG GVISPNFAGG LPESSVTGIL QQNSVGMPQQ KLPGNYGEFY 360
ANHLKK*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 3swm_A | 1e-53 | 14 | 181 | 18 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 1e-53 | 14 | 181 | 18 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 1e-53 | 14 | 181 | 18 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 1e-53 | 14 | 181 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 1e-53 | 14 | 181 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 1e-53 | 14 | 181 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 1e-53 | 14 | 181 | 18 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 1e-53 | 14 | 181 | 18 | 174 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in stress response (By similarity). Binds to DNA-specific sequences of CLPD1 and OAT promoters in vitro (PubMed:18813954). {ECO:0000250|UniProtKB:Q7F2L3, ECO:0000269|PubMed:18813954}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by salt and cold stresses. {ECO:0000269|PubMed:18813954}. |
