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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.7G317200.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
NAC |
Protein Properties |
Length: 368aa MW: 40836.5 Da PI: 6.7078 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.7G317200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 165.5 | 1.8e-51 | 11 | 138 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lp+GfrFhPtdeel+v+yL +++++ ++++ +i+ev+iy+++PwdLp+k+ +e+ewyfFs+rd+ky++g r+nra+ sgyWkatg+dk+
Sevir.7G317200.1.p 11 LPAGFRFHPTDEELIVHYLMNQASSLPCPV-PIIAEVNIYQCNPWDLPAKALFGENEWYFFSPRDRKYPNGARPNRAAGSGYWKATGTDKA 100
799***************************.88***************8877899************************************ PP
NAM 92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
+ls+ ++e++g+kk Lvfy g+ pkg+ktdW+mheyrl
Sevir.7G317200.1.p 101 ILSTpTSENIGVKKALVFYGGKPPKGTKTDWIMHEYRL 138
**9989999***************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 368 aa
Download sequence Send
to blast |
MPIASSRLPN LPAGFRFHPT DEELIVHYLM NQASSLPCPV PIIAEVNIYQ CNPWDLPAKA 60 LFGENEWYFF SPRDRKYPNG ARPNRAAGSG YWKATGTDKA ILSTPTSENI GVKKALVFYG 120 GKPPKGTKTD WIMHEYRLTG ANKTTKRRGS SMRLDDWVLC RIYKKSNNFQ FSDPDQEGST 180 VEEESLNNNM NSTSAASPKS DANDHNDDQF QFQPTTMSMS KSYSITDLLN TIDYSALSQL 240 LDAPAAAEPP LIYPTTTQTH QSLNYNNNVM NNNSHFNLPQ AADACPDYVA PNNCNGLKRK 300 RVMTMDGAES SFDDGSRKLL KLLPSDSRSS GHSHFVGSTS SYCNQQLVDT SGFQCSSLLS 360 YPFIEMQ*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | JN673545 | 0.0 | JN673545.1 Panicum virgatum cultivar Summer VS16 NAC transcription factor mRNA, complete cds. |