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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sevir.7G207100.3.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
NAC |
Protein Properties |
Length: 540aa MW: 58659.3 Da PI: 8.4306 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.7G207100.3.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 84.7 | 1.9e-26 | 20 | 166 | 2 | 127 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratk..sgyWk.atg 87
p+GfrF+Pt +elv +yL +k+ ++++ ++++ e+d y+++P+ L k ++++ +++wyf s+r+++y+ g+r++r t+ +g+Wk +tg
Sevir.7G207100.3.p 20 PVGFRFKPTLQELVEFYLLPKLLDNPTVPNDAVIEADAYECDPEILTKryEARGADENWYFLSPRSRRYPGGDRPTRRTAdnRGRWKpSTG 110
89************************87779999************86235555788*****************999655459****8899 PP
NAM 88 kdkevlsk.....kgel.............vglkktLvfykgrapkgektdWvmheyr 127
++k+ +++ k + + +tL++y g+ ++ +kt+W+mhe +
Sevir.7G207100.3.p 111 QSKPGKDAaaghsK--AkkvlkknlsvgayEFTENTLAYYVGDPRNETKTKWLMHELT 166
99998887766541..1456777888777788999*********************76 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 540 aa
Download sequence Send
to blast |
MEAAEETPSG GGDDEKVKYP VGFRFKPTLQ ELVEFYLLPK LLDNPTVPND AVIEADAYEC 60 DPEILTKRYE ARGADENWYF LSPRSRRYPG GDRPTRRTAD NRGRWKPSTG QSKPGKDAAA 120 GHSKAKKVLK KNLSVGAYEF TENTLAYYVG DPRNETKTKW LMHELTVPDP EKEKDLDSPT 180 AEKPRDHMLL NKYVMCRIYK SPLKKWKELE NEEGGTSSAS ACDEEVPTSS QSGPAPEGSG 240 EASALTPLSS KCAGKRPAAE QPTSEQANAP NKRASQHTMR APPVGVGAAG YYDYRSVPAQ 300 LPPLMQWPPA IYSSMQGPVK MQRRPPLMNA HNGQPPVQGP PVLKLYPPHR AAATVPNSLG 360 RTVMMRPPNL AAGPPVRPPS FPRPPPPQQQ QMEDMMMRQQ RVYAQLLAEM KLQKAPQERA 420 PCAGQQQIMP AASTQPACFD EGANHPAGTK VMVPCTQFPA PHNFYPCSGV QQKLQQSSPA 480 IPAASVPPGD PAPAADDAPG NKLPMQGDAN EGSGNGDCSD YRKQPFADFA AGLAAAKNF*
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 2e-16 | 20 | 200 | 18 | 164 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-16 | 20 | 200 | 18 | 164 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-16 | 20 | 200 | 18 | 164 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-16 | 20 | 200 | 18 | 164 | NO APICAL MERISTEM PROTEIN |
4dul_A | 2e-16 | 20 | 200 | 18 | 164 | NAC domain-containing protein 19 |
4dul_B | 2e-16 | 20 | 200 | 18 | 164 | NAC domain-containing protein 19 |
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