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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.7G199200.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
ERF |
Protein Properties |
Length: 341aa MW: 36333.7 Da PI: 4.7311 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.7G199200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 62 | 1.3e-19 | 146 | 197 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
+y+GVr+++ +g+++AeIrdp+ +g r++lg+++t+ +Aa+a+++a+ +++g+
Sevir.7G199200.1.p 146 KYRGVRQRP-WGKYAAEIRDPKRRG--SRVWLGTYDTPVDAARAYDRAAFRMRGA 197
8********.**********96554..**************************95 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 341 aa
Download sequence Send
to blast |
MDFVGDSDDF AIDFIREHLF DGGYGGVPVD STGVPDDVTF PVLQPQPEFQ PMSSFLPPPP 60 PPQQGYVDLT HEYMGPAPAP AAAAPAFRAQ ELSAAVMIKF GSEPSSPVRL PLTITVPPSS 120 YAWAESVTAP VPAAAATAAF DDDFRKYRGV RQRPWGKYAA EIRDPKRRGS RVWLGTYDTP 180 VDAARAYDRA AFRMRGAKAI LNFPNEIGTR GADLWTPPPP PPPAATQAAL ANKRKRQKEE 240 SDVEVLAVVN KAVKIETASS SSAQVSTTSP SSMSTGDTTA TASSTVTATT TEEAPGAEWL 300 PATPSSESWE QYWEALLGGL PPLSPRSPHP ALGFPQLTVN *
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ727525 | 6e-91 | KJ727525.1 Zea mays clone pUT5385 AP2-EREBP transcription factor (EREB61) gene, partial cds. |