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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.7G199000.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
ERF |
Protein Properties |
Length: 332aa MW: 35341.9 Da PI: 5.4279 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.7G199000.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 62.1 | 1.3e-19 | 144 | 195 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
+y+GVr+++ +g+++AeIrdp+ +g r++lg+++t+ +Aa+a+++a+ +++g+
Sevir.7G199000.1.p 144 KYRGVRQRP-WGKYAAEIRDPKRRG--SRVWLGTYDTPVDAARAYDRAAFRMRGA 195
8********.**********96554..**************************95 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 332 aa
Download sequence Send
to blast |
MNMDFVGDAD GFALDFIRDL LLGGDGRGAP VASPVVSDDV TFPVLQPQPE LQPMSSSFFP 60 PPQQHPGYID LMHEYMGSVP AAPAVGEAAF RAQEPPPPVM IKFGSEPPSP VRPPLIISVP 120 PSSYAWAGTA SAAAPAAAVE DYRKYRGVRQ RPWGKYAAEI RDPKRRGSRV WLGTYDTPVD 180 AARAYDRAAF RMRGAKAILN FPNEVGTRGA DLWAPPSPPA PVKQAATTAN KRKRQQPEDT 240 DDDVEVVAVV NKAVKLEVSS TSPSSMSTRE TTASSTVTST TTETGAGVQG LPVTPSSGSW 300 EQYWEALLGG LPPLSPLSPH PTLGFPQLIV N*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ727525 | 6e-97 | KJ727525.1 Zea mays clone pUT5385 AP2-EREBP transcription factor (EREB61) gene, partial cds. |