 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sevir.7G146000.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
| Family |
NAC |
| Protein Properties |
Length: 374aa MW: 41414.9 Da PI: 5.8759 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sevir.7G146000.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 86.5 | 4.9e-27 | 62 | 207 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra...... 77
lp+G++F+P+d el+ ++L+ k + + ++++ i+e +i++++P+++p +k + ++ +fF++ ++y g+rk+r+
Sevir.7G146000.1.p 62 LPAGVKFDPSDFELL-QHLEGKSSLLNskshalIDAFIPtIEEKgGICYTHPKNFP-GIKMDGSSFHFFHRVPNAYGCGHRKRRKvsgdvg 150
799************.899999766663445443443334777778**********.66778899*******************7677777 PP
NAM 78 ...tksgyWkatgkdkevlskkgelvglkktLvfykgrapkgekt...dWvmheyrl 128
++ +W++tgk k++ + +g ++g k++Lv+y+g+++ g++t +Wvmh+y+l
Sevir.7G146000.1.p 151 svcDEHIRWHKTGKPKPIRDDNGVKKGWKEILVLYRGSKRGGSNThidNWVMHQYHL 207
76655778*****************************999999885558*******8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 374 aa
Download sequence Send
to blast |
MDVLPFCSSW IMTGVGLIKK IRNATQSICL RLGELVAEPY IKCPNCECEI DTSNVHLVWP 60
ALPAGVKFDP SDFELLQHLE GKSSLLNSKS HALIDAFIPT IEEKGGICYT HPKNFPGIKM 120
DGSSFHFFHR VPNAYGCGHR KRRKVSGDVG SVCDEHIRWH KTGKPKPIRD DNGVKKGWKE 180
ILVLYRGSKR GGSNTHIDNW VMHQYHLDAY EEADGELVVS KVFYQLASKK NGKSEMDDIV 240
VESKASVAKI DHRTPKTDPP QPCFPNNSPC DTEQYTPIQV DQEEEECGTS FCPVMVKVEP 300
SECSARLAEL SPAVVVADLP ASDEPRQPRD TTGAGPEPEA PIPIDGSNTD LFHGLPDLDV 360
TFPELTFRSY QLS*
|
