 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sevir.7G135600.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
| Family |
C2H2 |
| Protein Properties |
Length: 356aa MW: 38433 Da PI: 10.7699 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sevir.7G135600.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 14.3 | 0.00012 | 128 | 145 | 3 | 20 |
ETTTTEEESSHHHHHHHH CS
zf-C2H2 3 CpdCgksFsrksnLkrHi 20
C Cg++F+ ++ L rH
Sevir.7G135600.1.p 128 CRVCGRRFRARDALLRHF 145
*****************6 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 356 aa
Download sequence Send
to blast |
MRRRPMTIST RAAAEAPFPG ATPSPMLRPL SFFRRRVLAA ALKLLAPPIS RSLSTAAAPA 60
ARKPSTAVAV LWDLAASRPP TTLPLYDAAV RLHLAATSFG RLRLSAAFVH PCHRLPAPAA 120
PAATTHLCRV CGRRFRARDA LLRHFDAIHA REHAKRLARI DSSRGDRRVR LAAALSLKLS 180
KYEKAARELT AGADAAAATP ADEIGRAGVR VVLTRTPAAS LRERAQQVLD EGSVGCLMLV 240
SGKDELASLL RVARERCVRS VVVGGESGLA RWADVGFSWA EVITGKARTA APSVSGKWRD 300
RDVLKGLEWR YEEDDEEEVV FEDSDGDGAE ELARKSKGKP WWKLDSDGED SSNGS*
|
