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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.7G120600.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
Trihelix |
Protein Properties |
Length: 422aa MW: 44209 Da PI: 6.5832 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.7G120600.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 41.7 | 3e-13 | 85 | 166 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergfer...spkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
W++ + aLi+a e+ +l+rg+l+ p+W+ev++++ ++ g+++ s +qCk++++ l+k+yk +++ + ++++fd+l+
Sevir.7G120600.1.p 85 WSEGATSALIDAWGERFVALGRGSLRHPQWQEVADAVsSRDGYSKapkSDVQCKNRIDTLKKKYKVERAKPVS-------SWQFFDRLD 166
*************************************87788876222667**************99887775.......599999986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 422 aa
Download sequence Send
to blast |
MDDDDDVSPD ASPSPDASPS PASSPGGPPS AALPVADPVT VASAPPGGGY AVALPIHRTA 60 ASLYATAGGG GGGGGGGGGG REDAWSEGAT SALIDAWGER FVALGRGSLR HPQWQEVADA 120 VSSRDGYSKA PKSDVQCKNR IDTLKKKYKV ERAKPVSSWQ FFDRLDFLLA PTYGNKPGSG 180 GGGGGGHNSN SRSPVPAALR VSFPQRSRTP LMPAAASAAK RRPPSPEPSV SSESSDGFPP 240 LPALPAANGK RRRTDEGRAD GGSSGDRTQG LRDLAQAIRR FGEAYERVEA AKLDQAAEME 300 RRRIDFAREL ESQRAQFFLN AQMELTQAKN HASSGVATIP AGATTVGGSS RRMSMATDAG 360 GSSNHHHHSR YRISHGDRHR NAPRSHYQQY HDNNHAAAAA AASEGEQSDE EEEDDEEEES 420 Q*
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G14180.1 | 6e-33 | sequence-specific DNA binding transcription factors |