 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sevir.6G256500.2.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
| Family |
NAC |
| Protein Properties |
Length: 505aa MW: 55142.6 Da PI: 4.24 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sevir.6G256500.2.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 170.5 | 5.4e-53 | 24 | 152 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89
l+pGfrFhPtdeelv++yLk+kv g++l++ ++i+evd+yk+ePwdLp +++++++++wyfFs+ d+k+a+ r+nrat+ gyWk+tgkd
Sevir.6G256500.2.p 24 LAPGFRFHPTDEELVSYYLKRKVLGRPLKV-DAIAEVDLYKLEPWDLPsrSRLRSRDSQWYFFSRLDRKHANRARTNRATSGGYWKTTGKD 113
579***************************.99**************95338888999********************************* PP
NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
+ev + + + vg+kktLvf+ grapkge+t+Wvmheyrle
Sevir.6G256500.2.p 114 REVRH-GPRIVGMKKTLVFHAGRAPKGERTNWVMHEYRLE 152
*****.999*****************************85 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009644 | Biological Process | response to high light intensity |
| GO:0009962 | Biological Process | regulation of flavonoid biosynthetic process |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005737 | Cellular Component | cytoplasm |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 505 aa
Download sequence Send
to blast |
MTHPSSSSSS APPPAAAAAE ATSLAPGFRF HPTDEELVSY YLKRKVLGRP LKVDAIAEVD 60
LYKLEPWDLP SRSRLRSRDS QWYFFSRLDR KHANRARTNR ATSGGYWKTT GKDREVRHGP 120
RIVGMKKTLV FHAGRAPKGE RTNWVMHEYR LEGDEAAGIP QDSFVVCRIF QKAGPGPQNG 180
AQYGAPFVEE EWEEDDEDVG LLPVEGDAVV DHEVPPGPKE IPGALEKGYL QMSDLIQGLG 240
DQNGNGTIGL PISDTSNNSN HSEDVDGNSG DILSDPNLGS NFLQYVEPGE QNSLMLSDNM 300
ISNANAGDFF NNSSPSDGFL ELKDFADAAN LDYPLGNEST VWPSDGWAWK TPNSLEAVNG 360
ANNDIPPLPD DQTFQPDELE QLLQSIQEDS HFGSSIIDPS HSSITNSVMP EDDSLMFYDA 420
PFDSTICDDG FRQVNGILSS PATNLSGIGM VDDGMPYYDA TDDNLFNDIL GSIQQPSGSS 480
HAFNGPVLTQ EMGRLRVVRT ERAL*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BT088197 | 0.0 | BT088197.2 Zea mays full-length cDNA clone ZM_BFc0057H24 mRNA, complete cds. |
