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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.6G256500.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
NAC |
Protein Properties |
Length: 662aa MW: 71597.5 Da PI: 4.329 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.6G256500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 169.8 | 8.6e-53 | 24 | 152 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89
l+pGfrFhPtdeelv++yLk+kv g++l++ ++i+evd+yk+ePwdLp +++++++++wyfFs+ d+k+a+ r+nrat+ gyWk+tgkd
Sevir.6G256500.1.p 24 LAPGFRFHPTDEELVSYYLKRKVLGRPLKV-DAIAEVDLYKLEPWDLPsrSRLRSRDSQWYFFSRLDRKHANRARTNRATSGGYWKTTGKD 113
579***************************.99**************95338888999********************************* PP
NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
+ev + + + vg+kktLvf+ grapkge+t+Wvmheyrle
Sevir.6G256500.1.p 114 REVRH-GPRIVGMKKTLVFHAGRAPKGERTNWVMHEYRLE 152
*****.999*****************************85 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009644 | Biological Process | response to high light intensity |
GO:0009962 | Biological Process | regulation of flavonoid biosynthetic process |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0005737 | Cellular Component | cytoplasm |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 662 aa
Download sequence Send
to blast |
MTHPSSSSSS APPPAAAAAE ATSLAPGFRF HPTDEELVSY YLKRKVLGRP LKVDAIAEVD 60 LYKLEPWDLP SRSRLRSRDS QWYFFSRLDR KHANRARTNR ATSGGYWKTT GKDREVRHGP 120 RIVGMKKTLV FHAGRAPKGE RTNWVMHEYR LEGDEAAGIP QDSFVVCRIF QKAGPGPQNG 180 AQYGAPFVEE EWEEDDEDVG LLPVEGDAVV DHEVPPGPKE IPGALEKGYL QMSDLIQGLG 240 DQNGNGTIGL PISDTSNNSN HSEDVDGNSG DILSDPNLGS NFLQYVEPGE QNSLMLSDNM 300 ISNANAGDFF NNSSPSDGFL ELKDFADAAN LDYPLGNEST VWPSDGWAWK TPNSLEAVNG 360 ANNDIPPLPD DQTFQPDELE QLLQSIQEDS HFGSSIIDPS HSSITNSVMP EDDSLMFYDA 420 PFDSTICDDG FRQVNGILSS PATNLSGIGM VDDGMPYYDA TDDNLFNDIL GSIQQPSGSS 480 HAFNGPVLTQ EVNNTMYTYS PTQKVLEPNF VVGAPSSARL PEAGSQLNCV VLPDGQAKSS 540 TYGKGFVKIL DSISAPPAFA LEPANLCKSL APISGARPNT IHVSAEVISI GSLAVASGPD 600 KWAQHKDQGM ELLFTDFEPG TRVHCGCNPI TTVLRGGFCL VFFSAIMLLV SYEVGMCIYG 660 K*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT063917 | 0.0 | BT063917.1 Zea mays full-length cDNA clone ZM_BFc0120A04 mRNA, complete cds. |