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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.6G137200.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
NF-YB |
Protein Properties |
Length: 301aa MW: 33890 Da PI: 5.1529 |
Description |
NF-YB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.6G137200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NF-YB | 72.4 | 7.2e-23 | 11 | 93 | 3 | 85 |
NF-YB 3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkv 85
++d lP + + +i+k++lP + ++++da++++ ec +efi +++se+++ c re++kti+++ +l al++lGf +y++++ +
Sevir.6G137200.1.p 11 KEDVSLPKSTMFKIIKEMLPPDVRVARDAQDLLVECCVEFINLLSSESNEVCSREEKKTIAPEHVLKALSDLGFREYIDEVYA 93
67999**************************************************************************9854 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 301 aa
Download sequence Send
to blast |
MDPMDIVGKS KEDVSLPKST MFKIIKEMLP PDVRVARDAQ DLLVECCVEF INLLSSESNE 60 VCSREEKKTI APEHVLKALS DLGFREYIDE VYAAYEQHKL DTLDSPKAGK FTGIEMTEEE 120 AVAEQQRMFA EARARMNNGA PKPKEPEQEA QQQPHPQLQL HTPPQQPMQP QLQLHSPTQQ 180 SVQPQLQLHP QVQPHPQQSQ VQPHPQQSQV QPQQAPQVQL HPQPQQAPQV QLHPQPQQSP 240 QVPLQSQPQQ TPQVPLHPSP EQPSQPQPQP QVHLQSQEPP QVQLQAQLQP QVQTEHGVDS 300 *
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT035946 | 0.0 | BT035946.1 Zea mays full-length cDNA clone ZM_BFb0089E11 mRNA, complete cds. |
GenBank | HQ858755 | 0.0 | HQ858755.1 Zea mays clone UT1497 CCAAT1-Dr1 transcription factor mRNA, partial cds. |