 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sevir.5G408300.1.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
Family |
NAC |
Protein Properties |
Length: 462aa MW: 51046.8 Da PI: 4.3151 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.5G408300.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 161.9 | 2.4e-50 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89
lppGfrFhPtd el ++yLk+k++gkkl + e+i+ev++yk+ PwdLp k +vk+++ ewyfF++rdkkyatg+r+nr t +g+Wk+tg+d
Sevir.5G408300.1.p 6 LPPGFRFHPTDVELCSYYLKRKITGKKLLV-EAIAEVELYKYSPWDLPdKsCVKSRDMEWYFFCPRDKKYATGSRANRLTPNGFWKSTGND 95
79*************************999.89**************96358899999********************************* PP
NAM 90 kevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
++++ +++ vg+kktLvf++g+ap+g +tdWvm eyr+
Sevir.5G408300.1.p 96 RTIVL-NTRIVGMKKTLVFHEGKAPRGDRTDWVMYEYRM 133
*****.999****************************98 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 462 aa
Download sequence Send
to blast |
MAQTSLPPGF RFHPTDVELC SYYLKRKITG KKLLVEAIAE VELYKYSPWD LPDKSCVKSR 60 DMEWYFFCPR DKKYATGSRA NRLTPNGFWK STGNDRTIVL NTRIVGMKKT LVFHEGKAPR 120 GDRTDWVMYE YRMEDNELDV GGFSKDAYVL CKIFKKSGPG PRIGEQYGAT FNEEEWDNIN 180 TETAFPLVPC PSSEVVGATN EPPFQHTVAS TSSVVSEPHV LTVASADGLP FEFSTSSITA 240 TDELQRHRLR HNGSEMVTAN CSSDALDACD PTEFGGITSE ETDKWVRFLN DSTERDGGAS 300 EKLAGLPAIS EAQAQALEMN SDYCYHELVR LVESGGVSTA NDLSPGYVNT ECLNTPMVSG 360 LGAGDDYLEI NDLFPLGETA SFELPAPESQ FPQYPLEQCP CNELNHPQYH DEGALAASLA 420 ADDFLPPISC SMPDISVDDV TCSTNLMWND CSNSTVWYPF S*
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | HM053568 | 0.0 | HM053568.1 Setaria italica NAC transcription factor gene, complete cds. |