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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Sevir.5G272000.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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| Family |
NAC |
| Protein Properties |
Length: 318aa MW: 34469.1 Da PI: 5.061 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sevir.5G272000.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 66.7 | 6.5e-21 | 21 | 151 | 6 | 128 |
NAM 6 rFhPtdeelvveyLkkkvegkklele.evikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknr..atksgyWkatgk 88
+ hP++e+l+ L++++++ + +i+++d+y+++P +L + +++++ wyfFs + k++ g+rk r t +g W++
Sevir.5G272000.1.p 21 ETHPSEEQLIASLLRPRAAAPGDDGPcAFIHDADVYSADPAELTAefapaVASNGDGAWYFFSAVRAKTRDGQRKARtvDTGEGCWHSEAG 111
669**************998885553056**************84467754455777********************5447799******* PP
NAM 89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
k+v+++ g+ g ++++ f ++ + + +++ W+m e +l
Sevir.5G272000.1.p 112 AKPVVDEAGRYLGHRQSFSFVTKVDGRRVRSGWLMVELSL 151
*********************99999999******99876 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 318 aa
Download sequence Send
to blast |
MVVATRRMTA PRPLPPPPDL ETHPSEEQLI ASLLRPRAAA PGDDGPCAFI HDADVYSADP 60
AELTAEFAPA VASNGDGAWY FFSAVRAKTR DGQRKARTVD TGEGCWHSEA GAKPVVDEAG 120
RYLGHRQSFS FVTKVDGRRV RSGWLMVELS LDGGAATDMV LCKIYFSPRA RVNGGAPAAS 180
SSSSLAGRKR KAGAAAGNNK NPAPAARQQR RRRARPTEAG AQSHDEDTDD DKGEESTTQG 240
GEVAAESSAA GEEEEELWTD GSSFSWWMKN RDRIMKEYNI VDRSDEELLE TLGLTEYMKA 300
LTSFDYGDDM DPRLRKA*
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