 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sevir.5G271900.1.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
Family |
NAC |
Protein Properties |
Length: 421aa MW: 43909.6 Da PI: 6.5915 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.5G271900.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 80.2 | 4.3e-25 | 56 | 187 | 5 | 128 |
NAM 5 frFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgk 88
f+ hPtd elv+ yL++ ve+ +i+e+d+y ++P dL + ++ +e+ wyfF++ ++k+ +gkrk r+++ g W++ k
Sevir.5G271900.1.p 56 FQSHPTDLELVNSYLRPWVETGLKAG-PFIHEADVYAADPADLTRrfapaVAQDGERAWYFFTPLRHKSVRGKRKARTVAsgGGCWHNEAK 145
7779***************9988555.78**************84467755566888********************54423789****** PP
NAM 89 dkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
+k+v++ +++++g ++++ f k++ + +t W+m e rl
Sevir.5G271900.1.p 146 SKPVFTGinGKRQIGHRQSFSFVKKDGGSRLRTGWLMMELRL 187
*****98889999**********99999999*******9886 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 421 aa
Download sequence Send
to blast |
MPQQVPRFHL QFGLSSPSPL PPPGPPRLPQ PAAAATAATA MVRSPSAASK PPCAAFQSHP 60 TDLELVNSYL RPWVETGLKA GPFIHEADVY AADPADLTRR FAPAVAQDGE RAWYFFTPLR 120 HKSVRGKRKA RTVASGGGCW HNEAKSKPVF TGINGKRQIG HRQSFSFVKK DGGSRLRTGW 180 LMMELRLLKD GAAGKEAQAE GALGNLVLCK VYRSPRNPEP SDPAPDPALK EEATAADDDD 240 ESSGATAEDD DDSSDAPEAT AAASGPTKKS DEEESSEATV AAPSRHSKAD DEISGAGAAA 300 AAPGRKEKAA GDEDSAETSA AAPPARKRKA PDDESSGAAA APAPAPKRSS GSPGAPAPPS 360 TELQCPHCGT HLVVTLKRPE TKSETEIAKD EPAPGASDAP PTRGDARGSS EKNLQFHHFL 420 *
|