|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sevir.5G240100.1.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
Family |
WRKY |
Protein Properties |
Length: 376aa MW: 39565.3 Da PI: 6.254 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.5G240100.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 82.8 | 3.3e-26 | 191 | 249 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YY+C+s gC+++k vers p v+++tY +H h+
Sevir.5G240100.1.p 191 SDPWAWRKYGQKPIKGSPYPRGYYKCSSMkGCMARKLVERSPAKPGVLIVTYMADHCHP 249
699***********************9988***************************97 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 376 aa
Download sequence Send
to blast |
MRGVLLLMAE HFNDWDLQAV VRSCGSVAHP DPPAGRGRPR AAAAPRAEAE AEAAPAEPTT 60 PAAARGGEVP ARAAPVAAAV QGHERAPPAV AAKGAALLYD LEYLDLDHKP FLLPVTPSPR 120 GARAGDDGRE REVMISFPAA AASTSGMQQQ RAVPPGRKAG ARTPRPKRSK KSQLKKVVRE 180 MPVADGGTSS SDPWAWRKYG QKPIKGSPYP RGYYKCSSMK GCMARKLVER SPAKPGVLIV 240 TYMADHCHPV PTQLNALAGT TRHKSSSAGT AAAAEDTATS SPRSHEQQGP SSVGRDGSTA 300 DAEDAARCDV VDGNDKSTAM ALEFGAEEIA AADDENELWP AGMDLDELLA PADDDFDFEH 360 VVDEEDGVLG RRLSL*
|