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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.5G133600.14.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
NAC |
Protein Properties |
Length: 439aa MW: 49235.9 Da PI: 7.7513 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.5G133600.14.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 114.2 | 1.3e-35 | 45 | 187 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra... 77
lp+G++F+Ptd+el+ e+L+ kv+++ +++ +i+++d i++++P++Lp v+ + + +fF++ +k+y+tg+rk+r+
Sevir.5G133600.14.p 45 LPAGVKFDPTDQELI-EHLESKVKDEGsrshplIDE--FIPTIDgedgICYTHPEKLP-GVTRDGLSKHFFHRPSKAYTTGTRKRRKiqt 130
799************.99******999677544333..3444433445**********.555666799******************7566 PP
NAM 78 .....tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
+ +W++tgk+++v++ +g+++g+kk+Lv+y g+++k+ekt+Wvmh+y+l
Sevir.5G133600.14.p 131 ecdvhKGETRWHKTGKTRPVMV-NGRQKGCKKILVLYtnFGKHRKPEKTNWVMHQYHL 187
6664433778************.999***********5547999999*********98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 439 aa
Download sequence Send
to blast |
MNRGHSSSSS KLINEKLEEH RISTAKHCPH CGEKIDSKPK DWVGLPAGVK FDPTDQELIE 60 HLESKVKDEG SRSHPLIDEF IPTIDGEDGI CYTHPEKLPG VTRDGLSKHF FHRPSKAYTT 120 GTRKRRKIQT ECDVHKGETR WHKTGKTRPV MVNGRQKGCK KILVLYTNFG KHRKPEKTNW 180 VMHQYHLGDL EEEKEGELVV CKIFYQTQPR QCSWSSERGA AAAAAVAAAT AQEQRRKDSG 240 SGSCSSRDHE VSATSFPAGY TVTTAVEMQQ QPADHFSFVP FRKTFDQEVG IGGDQVPSNQ 300 LGRSEQHHAG QEQQPHRPVL ATTAVPATAF LISRPSNPVS TIVPPAMQHA SVVLDHDQFH 360 VPAILLHHHD KFQNLQQQHQ HQQQQPQQKL DRRSAGLEEL IMGCTSSTST KGETSLPQSQ 420 ETEWPYPYWP PDNQDHHG*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator involved in xylem formation (PubMed:25265867, PubMed:25535195). Promotes the expression of the secondary wall-associated transcription factor MYB46 (PubMed:25265867). Functions upstream of NAC030/VND7, a master switch of xylem vessel differentiation (PubMed:25265867, PubMed:25535195). Acts as upstream regulator of NAC101/VND6 and LBD30/ASL19 (PubMed:25535195). {ECO:0000269|PubMed:25265867, ECO:0000269|PubMed:25535195}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KM017005 | 0.0 | KM017005.1 UNVERIFIED: Miscanthus lutarioriparius NAC7-like mRNA, complete sequence. |