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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.5G069700.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
NAC |
Protein Properties |
Length: 359aa MW: 39327.8 Da PI: 7.2507 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.5G069700.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 166.7 | 7.9e-52 | 33 | 161 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lppGfrF P+dee+v++yLk+kve++++++ +i evd+ ++eP +Lp k+k++ekewyfF ++d+ky+tg r nrat+ gyWkatgkdke
Sevir.5G069700.1.p 33 LPPGFRFYPSDEEIVTFYLKPKVEQRSFTC-IAIGEVDLKRTEPCELPGKAKTGEKEWYFFYEKDRKYRTGLRMNRATEGGYWKATGKDKE 122
79**************************99.88***************99999************************************** PP
NAM 92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrle 129
++++ +g l+g+kktLvfy+grap+g+kt+Wvmheyrle
Sevir.5G069700.1.p 123 IYRAmTGVLIGMKKTLVFYTGRAPRGQKTTWVMHEYRLE 161
**9988999****************************85 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 359 aa
Download sequence Send
to blast |
MADQGVLFAH DQGTTGDQHQ QPHGIGVGDD LELPPGFRFY PSDEEIVTFY LKPKVEQRSF 60 TCIAIGEVDL KRTEPCELPG KAKTGEKEWY FFYEKDRKYR TGLRMNRATE GGYWKATGKD 120 KEIYRAMTGV LIGMKKTLVF YTGRAPRGQK TTWVMHEYRL EGNNKSPHPS SSSTSTTMKS 180 SSASEATDEW VVCRVFRKAT GIKKAPTPPP YNHAIVDSGI DQRSIPMPPP LQLPMLPNFT 240 MDPVGSYYSI AGVSSSSLSP VIPPITAGTG NDMLQMNSAL FGNMMAVPPP MPFSHQLGIG 300 TASASTFMAA PQSEASSILS QKDVGMSLHQ TNAMDISSMV SATLESMGTM DMDGFWKY*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 5e-48 | 31 | 204 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 5e-48 | 31 | 204 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 5e-48 | 31 | 204 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 5e-48 | 31 | 204 | 15 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 5e-48 | 31 | 204 | 18 | 174 | NAC domain-containing protein 19 |
3swm_B | 5e-48 | 31 | 204 | 18 | 174 | NAC domain-containing protein 19 |
3swm_C | 5e-48 | 31 | 204 | 18 | 174 | NAC domain-containing protein 19 |
3swm_D | 5e-48 | 31 | 204 | 18 | 174 | NAC domain-containing protein 19 |
3swp_A | 5e-48 | 31 | 204 | 18 | 174 | NAC domain-containing protein 19 |
3swp_B | 5e-48 | 31 | 204 | 18 | 174 | NAC domain-containing protein 19 |
3swp_C | 5e-48 | 31 | 204 | 18 | 174 | NAC domain-containing protein 19 |
3swp_D | 5e-48 | 31 | 204 | 18 | 174 | NAC domain-containing protein 19 |
4dul_A | 5e-48 | 31 | 204 | 15 | 171 | NAC domain-containing protein 19 |
4dul_B | 5e-48 | 31 | 204 | 15 | 171 | NAC domain-containing protein 19 |
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Functional Description ? help
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Source |
Description |
UniProt | Binds to the promoter regions of genes involved in chlorophyll catabolic processes, such as NYC1, SGR1, SGR2 and PAO. {ECO:0000269|PubMed:27021284}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Repressed by the microRNA miR164. {ECO:0000269|PubMed:15294871, ECO:0000269|PubMed:17098808}. |