 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sevir.5G068000.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
| Family |
NAC |
| Protein Properties |
Length: 358aa MW: 38812.7 Da PI: 7.1273 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sevir.5G068000.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 163.7 | 6.6e-51 | 29 | 166 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lppGfrFhPtdeel+ +yL+k++++ ++++ vi+evdiyk++PwdLp+k+ +e ewyfFs+rd+ky++g r+nra+ sgyWkatg+dk+
Sevir.5G068000.1.p 29 LPPGFRFHPTDEELILHYLRKRAAAAPCPA-PVIAEVDIYKFDPWDLPAKAIFGEAEWYFFSPRDRKYPNGVRPNRAAGSGYWKATGTDKP 118
79***************************9.89***************77777999*********************************** PP
NAM 92 vlsk........kgel.....vglkktLvfykgrapkgektdWvmheyrl 128
++ + + +g+kk Lvfykgr pkg kt+W+mheyrl
Sevir.5G068000.1.p 119 ITLSdggaaaadS--SesramIGVKKALVFYKGRPPKGMKTSWIMHEYRL 166
***9666555550..055666***************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 358 aa
Download sequence Send
to blast |
MTIDLGLAPA SASASSGGRG GMPSPCTALP PGFRFHPTDE ELILHYLRKR AAAAPCPAPV 60
IAEVDIYKFD PWDLPAKAIF GEAEWYFFSP RDRKYPNGVR PNRAAGSGYW KATGTDKPIT 120
LSDGGAAAAD SSESRAMIGV KKALVFYKGR PPKGMKTSWI MHEYRLAEAL AAAATYRPMR 180
FKNSSMRLDD WVLCRIYKKT TPQLYSSPLQ DEPSSMDGGL DLGRQHDDSV SVDDIAATYA 240
PAGRLPRPAS ISDYLVDYTA VSELFESMPA PETTALLGTD AGSRLYVTNN GQAASSSSAQ 300
QQSSHKRRFM EDYSNGDLDM LHASSNKRVM SDQASMAAIN NTFSLFEPGQ TSLPDRI*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 5e-70 | 23 | 201 | 11 | 167 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 5e-70 | 23 | 201 | 11 | 167 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 5e-70 | 23 | 201 | 11 | 167 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 5e-70 | 23 | 201 | 11 | 167 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 6e-70 | 23 | 201 | 14 | 170 | NAC domain-containing protein 19 |
| 3swm_B | 6e-70 | 23 | 201 | 14 | 170 | NAC domain-containing protein 19 |
| 3swm_C | 6e-70 | 23 | 201 | 14 | 170 | NAC domain-containing protein 19 |
| 3swm_D | 6e-70 | 23 | 201 | 14 | 170 | NAC domain-containing protein 19 |
| 3swp_A | 6e-70 | 23 | 201 | 14 | 170 | NAC domain-containing protein 19 |
| 3swp_B | 6e-70 | 23 | 201 | 14 | 170 | NAC domain-containing protein 19 |
| 3swp_C | 6e-70 | 23 | 201 | 14 | 170 | NAC domain-containing protein 19 |
| 3swp_D | 6e-70 | 23 | 201 | 14 | 170 | NAC domain-containing protein 19 |
| 4dul_A | 5e-70 | 23 | 201 | 11 | 167 | NAC domain-containing protein 19 |
| 4dul_B | 5e-70 | 23 | 201 | 11 | 167 | NAC domain-containing protein 19 |
| Search in ModeBase |
