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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sevir.5G031200.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
WRKY |
Protein Properties |
Length: 574aa MW: 59606 Da PI: 6.9637 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.5G031200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 95.1 | 4.8e-30 | 284 | 342 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+Dg++WrKYGqK+ kg+++pr+YYrCt+a Cpv+k+v+r+aed++++++tYeg+Hnh+
Sevir.5G031200.1.p 284 SDGCQWRKYGQKMAKGNPCPRAYYRCTMAvACPVRKQVQRCAEDKTILVTTYEGHHNHP 342
7****************************9****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 574 aa
Download sequence Send
to blast |
METKKPERHC HDHVHDEEES QEGEDAPAME HGALSLHRGA TLFGQRHHEE AAAGRRGEIR 60 EVDFFSRDSG ARQQDDGGGG RRVTGGGRDD LNIGLDLLTT ATAATASAGE EVTAAKNHKM 120 EASAVEAELR RVVDENRRLR GMLEELTRSY GTLYQQLLQV TQHHPHQHQH PDLMNNRSSL 180 PHTHLNTMGA PNTSTRQLLE ARASSTAQTQ PDAGVEDEAS DGAGEASPSL SNNAGNNDSD 240 GKRKLSQDGT APSRENGEQA SSAELPGRKA RVSVRARSEA PMISDGCQWR KYGQKMAKGN 300 PCPRAYYRCT MAVACPVRKQ VQRCAEDKTI LVTTYEGHHN HPLPPAATTM ANTTSAAASM 360 LLSGPATSRD GAAALLGHPA ALFHHHASIP YASTMATLSA SAPFPTITLD LTQAPGSGGG 420 VGGLLGHGLQ RPPVGMIHPA VAPAMPFPVP SPLAMFLPQR APPTAAAAPA GLVARQQQQQ 480 SVMETVTAAI ATDPNFTTAL AAAISSVMAG AGGAHHQAQP TPRGSNTTGI AGEADGSAAG 540 AAPAAPTTTA AGAHAASGGS PRLATQSCTT STT*
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