 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sevir.4G246900.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
| Family |
GATA |
| Protein Properties |
Length: 363aa MW: 38586.8 Da PI: 8.9269 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sevir.4G246900.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 54.7 | 1.4e-17 | 180 | 213 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
Cs C+ttkTplWR+gp g+k+LCnaCG+++rk +
Sevir.4G246900.1.p 180 CSDCNTTKTPLWRSGPCGPKSLCNACGIRQRKAR 213
*******************************987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0007623 | Biological Process | circadian rhythm |
| GO:0009416 | Biological Process | response to light stimulus |
| GO:0009740 | Biological Process | gibberellic acid mediated signaling pathway |
| GO:0009910 | Biological Process | negative regulation of flower development |
| GO:0010187 | Biological Process | negative regulation of seed germination |
| GO:0010255 | Biological Process | glucose mediated signaling pathway |
| GO:0010380 | Biological Process | regulation of chlorophyll biosynthetic process |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 363 aa
Download sequence Send
to blast |
MSAIYMSQLS TALPLMEGDH HQDHHHHQGH FQAFNLPKDP PILFPFVISN SSASDSSLSY 60
GSGDHHHLFR QQHQAMLEPQ HMIGVSSAAS VFATPFPTVE SIRDDMIEPS SYDPYDMGRL 120
QVGGSLETAG SWTTPPAKMR ITRKASTDPG AAKKPRRKVQ GYEDMMGTSG QPNLGVNRVC 180
SDCNTTKTPL WRSGPCGPKS LCNACGIRQR KARRAMMASA GGSGPGPADG AKVATATPRD 240
AMAASVHHPK VKKEKRIDVD RSLPFKKRCK VVQDHAPVAA PPAAAHKAAA VPPTGEVVDA 300
SGLSSRDLVD DIGLISWSRS PAPPSSAASC SFRSSPGLPV QQDEVTDAAM LLMTLSCGLV 360
RS*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcriptional regulator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters (By similarity). Influences the expression of nuclear encoded chloroplast-targeted genes. Regulates chloroplast development and promotes chlorophyll accumulation. Modulates plant architecture (e.g. height, length and width of leaf blades, and flowering tillers production) and represses tillering, probably by modulating number of cells. Promotes senescence. Involved in grain filling, panicle development and starch production (PubMed:23548780). {ECO:0000250|UniProtKB:Q9SZI6, ECO:0000269|PubMed:23548780}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Induced by light, nitrogen, and cytokinin (benzyladenine) treatments, but repressed by darkness and gibberellin (GA). {ECO:0000269|PubMed:23548780}. |
