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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.3G393800.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
WRKY |
Protein Properties |
Length: 361aa MW: 38595.9 Da PI: 10.6213 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.3G393800.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 99.4 | 2.2e-31 | 294 | 351 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp ++++tYegeHnh+
Sevir.3G393800.1.p 294 DEYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERCVDDPAMLIVTYEGEHNHT 351
9*************************988****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 361 aa
Download sequence Send
to blast |
MEEVEVANRA AVESCHRVLS LLSQSQQQDP ALLKSIASET GEACAKFRKV TALLANGGSS 60 GHARGRFYRR GRPSGFLTLK GILGSSSDTP SELMPSAAAA AAAPSPSTSY AQLRSRIGGV 120 PDPRGLDLAS SSSKSGAHPY GAPKMVQPLS VQFQIGNVAH RYPFHQQPSR QKLQAEMFKR 180 SNSGISLKFD SPSPSGGAGM MSSARSFMSS LSMDGSVASL DGKRPFHLVG APVASDPADA 240 HRAPKRRCMG QGQDGTGKCA TTGRCHCSKR RKLRIKRSIK VPAISNKIAD IPPDEYSWRK 300 YGQKPIKGSP HPRGYYKCSS VRGCPARKHV ERCVDDPAML IVTYEGEHNH TRLPAQSAQT 360 *
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |