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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Sevir.3G388600.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
| Family |
Dof |
| Protein Properties |
Length: 271aa MW: 27396.3 Da PI: 9.6958 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sevir.3G388600.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 110.3 | 9.6e-35 | 60 | 114 | 6 | 60 |
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
+cprC s++tkfCyynny+++qPr+fC+aCrryWt GG++rnvPvGg++rk+ +
Sevir.3G388600.1.p 60 EQCPRCASRDTKFCYYNNYNTAQPRHFCRACRRYWTLGGSIRNVPVGGSTRKRPR 114
68*************************************************9865 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 271 aa
Download sequence Send
to blast |
MEAPLHQSPV PLPLPPPQEE AVIGAALLRQ AEAARAMMAA AAAAQHQHQQ PPPAAAMGRE 60
QCPRCASRDT KFCYYNNYNT AQPRHFCRAC RRYWTLGGSI RNVPVGGSTR KRPRPARPTR 120
ALAAATAAAA TTPASSAPFD TSSSSSPVAP AAALQGGLLG SLLLGSASAS TLLALGAAPL 180
LEGRLGFGPG LGQPALLAGA NAAAGDLSRL DFGGAGPLLW PAAATVLEGD RAFPLPPPAA 240
ALWQKELAAA APPPVEAGGL HHGGSPHLLL *
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AL954829 | 9e-74 | AL954829.6 Oryza sativa chromosome 12, . BAC OSJNBa0044E20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence. |
| GenBank | AP014968 | 9e-74 | AP014968.1 Oryza sativa Japonica Group DNA, chromosome 12, cultivar: Nipponbare, complete sequence. |
