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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Sevir.3G333700.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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| Family |
NAC |
| Protein Properties |
Length: 278aa MW: 29618.3 Da PI: 10.1789 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Sevir.3G333700.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 144.6 | 5.4e-45 | 13 | 152 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdL.pkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90
lppGfrF+Ptdeelvv+yL++++ +++l+++ i++v+i+ ++P+dL p +e+e yfF++++ ky +g+r+nrat +gyWkatgk+k
Sevir.3G333700.1.p 13 LPPGFRFRPTDEELVVHYLRRRALSSPLPAAVDIPDVRILAHDPSDLlP--PGWSEQERYFFTCKEAKYVKGRRANRATGAGYWKATGKEK 101
79***************************9666**************43..3447899********************************* PP
NAM 91 evlsk...........kgel....vglkktLvfykgrapkgektdWvmheyrl 128
+v ++ + + vg+k++Lvfy+g+ p+g+ktdWvmheyrl
Sevir.3G333700.1.p 102 PVAVAvpapaskggqgQ--AqavlVGMKRSLVFYRGKPPTGSKTDWVMHEYRL 152
***99999988776541..15566***************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 278 aa
Download sequence Send
to blast |
MEVAKETVTK PRLPPGFRFR PTDEELVVHY LRRRALSSPL PAAVDIPDVR ILAHDPSDLL 60
PPGWSEQERY FFTCKEAKYV KGRRANRATG AGYWKATGKE KPVAVAVPAP ASKGGQGQAQ 120
AVLVGMKRSL VFYRGKPPTG SKTDWVMHEY RLAGAGLAPC RRAAVQPDGG DAAAANADVS 180
RPAEGWVLCR VFRKKGSASA NAAAAAPASP ADEGSDGEAE EGGGRAFIDF FARADARQRQ 240
RRASSPVVSS SCLTDASHEQ HGREQETTSR GRGGALP*
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| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 5e-37 | 8 | 198 | 12 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 5e-37 | 8 | 198 | 12 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 5e-37 | 8 | 198 | 12 | 169 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 5e-37 | 8 | 198 | 12 | 169 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 5e-37 | 8 | 198 | 15 | 172 | NAC domain-containing protein 19 |
| 3swm_B | 5e-37 | 8 | 198 | 15 | 172 | NAC domain-containing protein 19 |
| 3swm_C | 5e-37 | 8 | 198 | 15 | 172 | NAC domain-containing protein 19 |
| 3swm_D | 5e-37 | 8 | 198 | 15 | 172 | NAC domain-containing protein 19 |
| 3swp_A | 5e-37 | 8 | 198 | 15 | 172 | NAC domain-containing protein 19 |
| 3swp_B | 5e-37 | 8 | 198 | 15 | 172 | NAC domain-containing protein 19 |
| 3swp_C | 5e-37 | 8 | 198 | 15 | 172 | NAC domain-containing protein 19 |
| 3swp_D | 5e-37 | 8 | 198 | 15 | 172 | NAC domain-containing protein 19 |
| 4dul_A | 5e-37 | 8 | 198 | 12 | 169 | NAC domain-containing protein 19 |
| 4dul_B | 5e-37 | 8 | 198 | 12 | 169 | NAC domain-containing protein 19 |
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