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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.3G295200.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
WRKY |
Protein Properties |
Length: 400aa MW: 42334.3 Da PI: 6.7181 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.3G295200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 86 | 3.3e-27 | 206 | 265 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58
dDgy+WrKYGqK++ gs++prsYYrCt++ gC++kkkv+r ++dp + e+tY g+H++
Sevir.3G295200.1.p 206 DDGYTWRKYGQKDILGSRYPRSYYRCTHKnyyGCEAKKKVQRLDDDPFMYEVTYCGNHTC 265
8***************************99999*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 400 aa
Download sequence Send
to blast |
MHVLAAPPLA LLGGLDHRDS TRELGGRPAM DDVLSQIHEG FRLATELMAE IPATQNDQAY 60 LAERCHGIAQ AYLAAMRMLG YPHGADDLSP PAPAPPHPFG GGGGDGSHGH LQQLDLLRPF 120 LGGGSSLPAQ FPQHLGRLLE SSPFGTPGAD AFGAGTSGGP VRRQASSSRS SPPVQPRQHR 180 RRRESGERTT MMVPVQRTGN TDQPPDDGYT WRKYGQKDIL GSRYPRSYYR CTHKNYYGCE 240 AKKKVQRLDD DPFMYEVTYC GNHTCLTSMT PLLTLPAPNT AAAVSTAIAN MLTNSPPTGS 300 AAILAGQDLV MAPAAAEHPT PPALSTAIQL GISWMPSELV SSSAGQGSSS AQVNASAASG 360 RDLEYPVMDL ADAMFNSGSS GGSSMDAIFP AHHHDQRDS*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK287817 | 1e-89 | AK287817.1 Oryza sativa Japonica Group cDNA, clone: J065181J09, full insert sequence. |