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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.3G248700.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
bZIP |
Protein Properties |
Length: 646aa MW: 68126.3 Da PI: 9.3141 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.3G248700.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 42.1 | 2e-13 | 174 | 235 | 1 | 62 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62
e++ +r+ r+++NRe+A+ sRqRKk ++eeLeekvk++ + +L ++++ + e a+l+++
Sevir.3G248700.1.p 174 EEDKRRTARLMRNRESAQLSRQRKKRYVEELEEKVKSMHSVINDLNSKISFIVAENATLRQQ 235
5677899*********************************999******9999999988887 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0042538 | Biological Process | hyperosmotic salinity response |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0005783 | Cellular Component | endoplasmic reticulum |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 646 aa
Download sequence Send
to blast |
MAEPALLDPS PFDLRHYPTH IFDPDLPLAG GDLPLEFAGD DGLDFDLPVD FSIDDFLLRS 60 PDRGGDGDDS GEGSAAGSGP AASSSASPAT SAANSAVANA GDREVKHEDS DEGRSGAAPS 120 WSLKRKQASP GASSDGVKCR RSGDGELSPS VSASASASRA AAEDSDERGA GGEEEDKRRT 180 ARLMRNRESA QLSRQRKKRY VEELEEKVKS MHSVINDLNS KISFIVAENA TLRQQLGGGG 240 VSAPPPGVYP PPPLPGIHFP WVPGYAMRPH GSHVPLVPIP RLKPQQAAAA AKVSKKPEVK 300 KTVENKSKTK TKKVASVSLL GLLFVALIFG AFVPGFNHNF GMSGRRNDVM FGNFGHSDAR 360 VFSVTNHGKG PKGGLNSSDM TDTDPGMMTG NSDGAGQKHR PAHNSSEILP ALLYVPRNGK 420 HVKINGNLII HSVLASEKAV AHRASNGQSV KDHKETSVAI ARYLSPSGKD ENSKGTFPPD 480 AALPQWFREG MEGPILNSGM CSEVFQFDIS AASAKSGGII PASPTVNSSS VNATQKIPKS 540 GGKLKNRRIM YNEAIPLTGK TVNSTEPRTF NSTSESSKVP DSKPASSVVV SVLADPREAG 600 NGDGDPRVSP KPLSRIFVVV LLDGVRYVTY SCTLPFKSAS PHLVN*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 176 | 198 | KRRTARLMRNRESAQLSRQRKKR |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor involved in endoplasmic reticulum (ER) stress response. Acts as ER stress sensor and activates the transcription factor BZIP50 and the chaperone BIP1. {ECO:0000269|PubMed:22050533, ECO:0000269|PubMed:22084314}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by dithiothreitol- and tunicamycin-induced endoplasmic reticulum (ER) stress response. {ECO:0000269|PubMed:22084314}. |
Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] - Cheng CH, et al.
A fine physical map of the rice chromosome 5. Mol. Genet. Genomics, 2005. 274(4): p. 337-45 [PMID:16261349] - Takahashi H,Kawakatsu T,Wakasa Y,Hayashi S,Takaiwa F
A rice transmembrane bZIP transcription factor, OsbZIP39, regulates the endoplasmic reticulum stress response. Plant Cell Physiol., 2012. 53(1): p. 144-53 [PMID:22084314] - Ohta M, et al.
Analysis of rice ER-resident J-proteins reveals diversity and functional differentiation of the ER-resident Hsp70 system in plants. J. Exp. Bot., 2013. 64(18): p. 5429-41 [PMID:24153418] - Cheng Q, et al.
An alternatively spliced heat shock transcription factor, OsHSFA2dI, functions in the heat stress-induced unfolded protein response in rice. Plant Biol (Stuttg), 2015. 17(2): p. 419-29 [PMID:25255693]
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