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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.3G242500.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
NAC |
Protein Properties |
Length: 402aa MW: 44707.8 Da PI: 12.0938 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.3G242500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 161.3 | 3.7e-50 | 73 | 197 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lppGfrFhPtdeelv++yL+++++g ++++ +i+e+d+yk++Pw+Lp+++ +ekewyfFs+rd+ky++g+r+nra+ +gyWkatg dk+
Sevir.3G242500.1.p 73 LPPGFRFHPTDEELVTHYLCRRCAGLPISV-PIIAEIDLYKYDPWQLPRMALYGEKEWYFFSPRDRKYPNGSRPNRAAGTGYWKATGADKP 162
79****************************.88***************7666789************************************ PP
NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
v + + +kk Lvfy g+ap+g kt+W+mheyrl
Sevir.3G242500.1.p 163 VGT--PKPLAIKKALVFYAGKAPRGDKTNWIMHEYRL 197
*99..7789**************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 402 aa
Download sequence Send
to blast |
MTRRALYMAR VPHGARFHAS SRLAAGLEER GGIESAADLT SQFELRKRNQ PPIEEEEMSG 60 GGVPAAQPQE LQLPPGFRFH PTDEELVTHY LCRRCAGLPI SVPIIAEIDL YKYDPWQLPR 120 MALYGEKEWY FFSPRDRKYP NGSRPNRAAG TGYWKATGAD KPVGTPKPLA IKKALVFYAG 180 KAPRGDKTNW IMHEYRLADV DRSARKKNHS LRMIGCCAES TTRRARRRSR RPAPATGPGR 240 AAATVCRRPW PWARRRSRSH PCCRPPPPGP GTRRRRSRSW QRTTRSGRRT RCPGRTARTR 300 AARGTRWRPP RPAAAAAASG PRCRASPRSP SGSARSQAAP ARASTRPARC SAGTTSLARR 360 RAAAATRCSR TSSRTGASRT EEGRWQVVVT SWDRWDRGGS A*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 222 | 230 | RRARRRSRR |
2 | 253 | 275 | RRRSRSHPCCRPPPPGPGTRRRR |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT037323 | 0.0 | BT037323.1 Zea mays full-length cDNA clone ZM_BFb0162P01 mRNA, complete cds. |
GenBank | KM987612 | 0.0 | KM987612.1 Zea mays NAC protein (SNAC052) mRNA, complete cds. |