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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.3G227500.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
MYB |
Protein Properties |
Length: 298aa MW: 32690.8 Da PI: 6.7961 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.3G227500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 22.8 | 2.1e-07 | 32 | 76 | 2 | 44 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
g+WT+eE +l+ +a ++ + +W+++a++++ gR +++ ++
Sevir.3G227500.1.p 32 GAWTQEENKLFERALARVDWDapdRWERVAAMLP-GRMVPDVVAHF 76
79****************99999***********.***99999997 PP
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2 | Myb_DNA-binding | 45.8 | 1.4e-14 | 143 | 187 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
+WT+eE++l++ + k++G g+W+ I+r + + Rt+ q+ s+ qky
Sevir.3G227500.1.p 143 PWTEEEHKLFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQKY 187
8*******************************************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 298 aa
Download sequence Send
to blast |
MMESWMEVLP PPYFAGQAAG RFLPDRRAPG PGAWTQEENK LFERALARVD WDAPDRWERV 60 AAMLPGRMVP DVVAHFDDLE NDVCFIEAGL LPFPQYGGGA AQNAGFTFDW DGDAGGLGFK 120 RSCYMVAGKR GRGPDQERKK GVPWTEEEHK LFLMGLKKYG RGDWRNISRN FVTSRTPTQV 180 ASHAQKYFIR LNSGGKDKRR SSIHDITTVN LPDDDGGNPS PSPPSVLTSA STPSSTGGPV 240 ISEQFGVLVD SKLPPSHHFM PHPYGNVKLE PGNSHHGGFL DDSVLMQMQC GQLQPLG*
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Functional Description ? help
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Source |
Description |
UniProt | Involved in the dorsovental asymmetry of flowers. Promotes ventral identity. {ECO:0000269|PubMed:11937495, ECO:0000269|PubMed:9118809}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT054281 | 0.0 | BT054281.1 Zea mays full-length cDNA clone ZM_BFb0211P03 mRNA, complete cds. |
GenBank | BT055802 | 0.0 | BT055802.1 Zea mays full-length cDNA clone ZM_BFb0203M07 mRNA, complete cds. |
GenBank | BT066672 | 0.0 | BT066672.1 Zea mays full-length cDNA clone ZM_BFb0049J12 mRNA, complete cds. |
GenBank | HQ858785 | 0.0 | HQ858785.1 Zea mays clone UT1771 MYB transcription factor mRNA, partial cds. |