PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.3G209000.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family WRKY
Protein Properties Length: 279aa    MW: 31096.7 Da    PI: 7.6344
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.3G209000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY57.13.7e-18136197259
                         --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTT.EEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpk.vveitYegeHnhe 59 
                         +D ++WrKYG K++ ++e+pr YY+C ++   +Cp+kk v+++++ ++  + +t  +eH++e
  Sevir.3G209000.1.p 136 NDRFHWRKYGEKTILNAEYPRLYYKCGYSddhKCPAKKYVQQQSNSGHpRFMVTLINEHTCE 197
                         79*************************998899********998877636899999999997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.4E-19127197IPR003657WRKY domain
SuperFamilySSF1182906.8E-19130197IPR003657WRKY domain
PROSITE profilePS5081114.24130180IPR003657WRKY domain
SMARTSM007744.1E-26135198IPR003657WRKY domain
PfamPF031068.6E-19136197IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MSTRLNSARK SQPPRSSDRR DAAIQELRRG TQLADLLRKQ VKLIPEPNRR DAAVANVGEI  60
SMAMESSLNI LQYEIEHPSS PEVGTVDMAA HAGYSSDGGT GERNRAVPRT RRVRHRRGRH  120
GVELPMKEIL TEAPENDRFH WRKYGEKTIL NAEYPRLYYK CGYSDDHKCP AKKYVQQQSN  180
SGHPRFMVTL INEHTCEALF PDEPTSSSSS ASQVLDFTKA SLSPPLMAAA ASGSLKKEEE  240
DSMSVCMHSY SYDEYLSSSF PTMSPDGDQV QFSPGPGW*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSevir.3G209000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022681297.10.0probable WRKY transcription factor 63
TrEMBLK3Z8R30.0K3Z8R3_SETIT; Uncharacterized protein
STRINGSi022933m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP99932944
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66600.13e-13ABA overly sensitive mutant 3