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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sevir.3G208800.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
WRKY |
Protein Properties |
Length: 294aa MW: 32134.9 Da PI: 4.8049 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.3G208800.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 82.4 | 4.4e-26 | 123 | 183 | 1 | 58 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnh 58
++Dg+ WrKYGqKe++gs++pr Y+rCt++ gC+++++v+r + dp+++ itY g+H++
Sevir.3G208800.1.p 123 MEDGFIWRKYGQKEIHGSKYPRFYFRCTYKedhGCTARRQVQRWEADPSLFLITYFGDHTC 183
58***************************99999*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 294 aa
Download sequence Send
to blast |
MAMASAPAPV CAALKLVARG RESAAVLQTL LLGQQAPADG SASAAPHGLQ ELTNQILRCC 60 DRALAALRHS GTEEEDADAA GGIRKRKPER GNGAPAASPA RASKRMRMRG GEMGTRVEKR 120 ATMEDGFIWR KYGQKEIHGS KYPRFYFRCT YKEDHGCTAR RQVQRWEADP SLFLITYFGD 180 HTCCRDDDEP PAPFVINFSS SSSDGKPSGS PWPSCDGDGL VVSKTPDLCN SPEESEFVDQ 240 STSVPELTRM SSMEWDSLLD GCLDWMLWDG ESSFDIIGDE FIGHDIDYLD VLS*
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