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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sevir.3G199800.2.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
bZIP |
Protein Properties |
Length: 332aa MW: 36537.3 Da PI: 8.2168 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.3G199800.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 30.7 | 6.7e-10 | 47 | 86 | 5 | 41 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41
k+ rr+++NReAAr+sR+RKka++e+Le+ k ++Le+e
Sevir.3G199800.2.p 47 KALRRLAQNREAARKSRLRKKAYVEQLENsrlKLAQLEQE 86
788*************************933334444444 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 332 aa
Download sequence Send
to blast |
MAYASPGTDT STDLDTDEKN QMLELGRLAS LTASGSGDKS NDKLGQKALR RLAQNREAAR 60 KSRLRKKAYV EQLENSRLKL AQLEQELQRA RKQGIFIPTP GDQPHSTSEN ALAFDMGYAR 120 WQEDHKKQID ELRTALNAHA SDDDLRRITD SIMAHYCEAF RLKGAAAKAD AFHVLSAMWK 180 TPVERCFLWL GGFRPSELLK LLASHLEPLT EQQLASICNL QQSSQQAEED LSQGVKALQQ 240 SVAKTLASGP LCPAGSSGSA ADCSGQMAVA IGELGTLVNF LEEADNLRLQ TLQQMQRILT 300 TRQSARALLA ISDYSSRLRA LSSLWIARPR E*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |