|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sevir.3G174600.1.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
|
Family |
WRKY |
Protein Properties |
Length: 233aa MW: 24009.1 Da PI: 9.0973 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.3G174600.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 102.1 | 3.2e-32 | 145 | 203 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK vk+s +prsYYrCt+++C+vkk+v+r a+d+ +v++tYeg Hnh+
Sevir.3G174600.1.p 145 LDDGYRWRKYGQKAVKNSAYPRSYYRCTHHTCNVKKQVQRLAKDTGIVVTTYEGVHNHP 203
59********************************************************8 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 233 aa
Download sequence Send
to blast |
MENPLHGSGQ QPSPQLPGYL ASPVAAAPQQ ACTNPIAPGL GAMSCPPPAA AVDWASLLLP 60 CAPGSLHVGT TMPQQAVAGA GAGEVESGGG GAVVVAGGCG GSSSSTSGDG DKATRAGGGK 120 GGGRGRKKAS QPRFAFQTRS ENDILDDGYR WRKYGQKAVK NSAYPRSYYR CTHHTCNVKK 180 QVQRLAKDTG IVVTTYEGVH NHPCEKLMEA LSPILKQLQL LSQLQCSTNQ LI*
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | EU958074 | 1e-136 | EU958074.1 Zea mays clone 1671428 WRKY23 - superfamily of TFs having WRKY and zinc finger domains mRNA, complete cds. |