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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.3G141700.2.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
WRKY |
Protein Properties |
Length: 294aa MW: 31452.9 Da PI: 5.5478 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.3G141700.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 80.1 | 2.4e-25 | 124 | 185 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
ldDg +WrKYGqK++ g+++pr+Y+rCt++ gC ++k+v+r+a dp + +++Y+g H++
Sevir.3G141700.2.p 124 LDDGISWRKYGQKDILGAKYPRAYFRCTHRhtqGCAATKHVQRAAGDPLLYDVVYHGAHTCA 185
58***************************98999**************************96 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 294 aa
Download sequence Send
to blast |
MEVCGVGGGE KSALASELAQ MQAMVRELGA HMDQQDLPAA VRELCGELCG ELASSVDRSI 60 RIARSCGLAG ADSPGSRDGS PRSASDGTQH PAAAAGGNAQ SKRRKGTPCV RRQVRVASVD 120 MAPLDDGISW RKYGQKDILG AKYPRAYFRC THRHTQGCAA TKHVQRAAGD PLLYDVVYHG 180 AHTCAQAAHP GAEQLRQQLQ LQPEPGHADA GQEQSSPPLA LQETEGLQAG PEPMTPYWFG 240 APAPGDGADF PLLSPTGLEW QLRSMDHETQ FEEFYTNAAD PSQWDYQDLY ATN*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KU058619 | 1e-131 | KU058619.1 UNVERIFIED: Panicum miliaceum WRKY1-like gene, complete sequence. |