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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.3G141700.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
WRKY |
Protein Properties |
Length: 295aa MW: 31540 Da PI: 5.5478 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.3G141700.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 80.1 | 2.4e-25 | 125 | 186 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
ldDg +WrKYGqK++ g+++pr+Y+rCt++ gC ++k+v+r+a dp + +++Y+g H++
Sevir.3G141700.1.p 125 LDDGISWRKYGQKDILGAKYPRAYFRCTHRhtqGCAATKHVQRAAGDPLLYDVVYHGAHTCA 186
58***************************98999**************************96 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 295 aa
Download sequence Send
to blast |
MEVCGVGGGE KSALASELAQ MQAMVRELGA HMDQQDLPAA VRELCGELCG ELASSVDRSI 60 RIARSCGLAG ADSPGSRDGS PRSASDGTQH PAAAAGGNAQ SKRSRKGTPC VRRQVRVASV 120 DMAPLDDGIS WRKYGQKDIL GAKYPRAYFR CTHRHTQGCA ATKHVQRAAG DPLLYDVVYH 180 GAHTCAQAAH PGAEQLRQQL QLQPEPGHAD AGQEQSSPPL ALQETEGLQA GPEPMTPYWF 240 GAPAPGDGAD FPLLSPTGLE WQLRSMDHET QFEEFYTNAA DPSQWDYQDL YATN*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KU058619 | 1e-124 | KU058619.1 UNVERIFIED: Panicum miliaceum WRKY1-like gene, complete sequence. |