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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.3G134700.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
NAC |
Protein Properties |
Length: 556aa MW: 61361.3 Da PI: 4.7237 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.3G134700.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 80.3 | 4.2e-25 | 21 | 167 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eekewyfFskrdkkyat.gkrknratk....sgyWkat 86
ppG++F Pt++el+ yL+ k+eg++ +l vi+ev i++++P +L +++k+ +e++wyfF+ r+ ++++ ++++nr+++ +++Wkat
Sevir.3G134700.1.p 21 PPGYHFVPTEQELL-SYLRSKIEGQEQPL-AVINEVAILDWQPGSLVEAYKGyGENKWYFFTVREPSSSNkEEEPNRKVRvpgvKATWKAT 109
9*************.9**********999.89**************8544443888*******999888636678887666667899**** PP
NAM 87 gkdkevlskkgel..................vglkktLvfykgrapkgektdWvmheyrl 128
g+ ++ +++ ++ vg+k++L++ + +a++ +W mhey l
Sevir.3G134700.1.p 110 GSVAPIAAARAKQqddggkpaeeeeeeekviVGTKRVLIYQSSDAEE--DGKWSMHEYIL 167
*******984444456777777888888888*********9777766..89*******87 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 556 aa
Download sequence Send
to blast |
MEAAVVQEEQ HHELAPQLQF PPGYHFVPTE QELLSYLRSK IEGQEQPLAV INEVAILDWQ 60 PGSLVEAYKG YGENKWYFFT VREPSSSNKE EEPNRKVRVP GVKATWKATG SVAPIAAARA 120 KQQDDGGKPA EEEEEEEKVI VGTKRVLIYQ SSDAEEDGKW SMHEYILKGH AKIGQYALCS 180 IQRKQHSDTV DNAGEGTSSR KRTKATNGDP GKAKKRRTTK PDTQPEGLLL QQLQETGSIE 240 APLKQKSRIR RTATKRKNKA SVQDDEGQQH QEVAPVSSVK PPLTPPQQAP SQALQQSAPL 300 LFAAPLQGYT SPTDGMLGAS APMHEEGRRA NSFQYDDDMP LSDLDLENIM TLCEQEERPQ 360 SFADNEFITG SHAQYQQCYQ QDDHDMFGDH DQYLYPELQN FPGNITQNNS SWNQGQLQNY 420 QQEIIGGAFA APDLQHTDAQ HYGQSPYGQL CYSSPLPQTG HYSSDHFTGS VEGDSAASGS 480 DGDMGLTAAE LFAIDALRDY DPQDCVGAQG SGSNPEAFQR QDKLLWPCGQ QQHAASGHGG 540 DGPPPSRCAS EFWER*
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3D Structure ? help Back to Top |
 |
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 4e-14 | 17 | 187 | 14 | 168 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 4e-14 | 17 | 187 | 14 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 4e-14 | 17 | 187 | 14 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 4e-14 | 17 | 187 | 14 | 168 | NO APICAL MERISTEM PROTEIN |
3swm_A | 5e-14 | 17 | 187 | 17 | 171 | NAC domain-containing protein 19 |
3swm_B | 5e-14 | 17 | 187 | 17 | 171 | NAC domain-containing protein 19 |
3swm_C | 5e-14 | 17 | 187 | 17 | 171 | NAC domain-containing protein 19 |
3swm_D | 5e-14 | 17 | 187 | 17 | 171 | NAC domain-containing protein 19 |
3swp_A | 5e-14 | 17 | 187 | 17 | 171 | NAC domain-containing protein 19 |
3swp_B | 5e-14 | 17 | 187 | 17 | 171 | NAC domain-containing protein 19 |
3swp_C | 5e-14 | 17 | 187 | 17 | 171 | NAC domain-containing protein 19 |
3swp_D | 5e-14 | 17 | 187 | 17 | 171 | NAC domain-containing protein 19 |
4dul_A | 4e-14 | 17 | 187 | 14 | 168 | NAC domain-containing protein 19 |
4dul_B | 4e-14 | 17 | 187 | 14 | 168 | NAC domain-containing protein 19 |
Nucleic Localization
Signal ? help
Back to Top |
 |
No. |
Start |
End |
Sequence |
1 | 199 | 216 | RKRTKATNGDPGKAKKRR |