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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Sevir.3G132200.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
WRKY |
Protein Properties |
Length: 322aa MW: 34713.8 Da PI: 5.2865 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.3G132200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 82 | 6.2e-26 | 154 | 212 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D ++WrKYGqK++kgs++pr+YY+C+s C+++k vers p v+++tY eH h
Sevir.3G132200.1.p 154 TDLWAWRKYGQKPIKGSPYPRGYYKCSSLkACMARKLVERSPAKPGVLVVTYIAEHCHA 212
699************************9989*************************996 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 322 aa
Download sequence Send
to blast |
MEFSNDWDLQ AVVRSCGTAA CSGSGSEAAP PPRREEDRRV VLVGRAAVAA APEFLVGRPV 60 RPPAALGDLD YLDLEHELPR APFSITPSSE RGPLDHEVLL SFPAASTSGQ QLLQQRKQPG 120 RKPGVRTPRP KRSKKSQLKK VVCEVPVADG GVSTDLWAWR KYGQKPIKGS PYPRGYYKCS 180 SLKACMARKL VERSPAKPGV LVVTYIAEHC HAVPTMLNAL AGTTRHRPAS PDGDGHQASH 240 GASDEASAGR REEDSADASS MTVDGGGGAE TADDENEPWQ QADMALDDYP LDLDDLLGPF 300 EDGFDRFFED DDGVLERRVS L*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK111416 | 2e-96 | AK111416.1 Oryza sativa Japonica Group cDNA clone:002-182-G03, full insert sequence. |
GenBank | AY870601 | 2e-96 | AY870601.1 Oryza sativa (japonica cultivar-group) WRKY12 mRNA, complete cds. |