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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Sevir.3G084500.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family |
WRKY |
Protein Properties |
Length: 244aa MW: 27628.3 Da PI: 6.5607 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Sevir.3G084500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 59.6 | 6.2e-19 | 96 | 159 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTT...EEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpk...vveitYegeHnhe 59
Dg++WrKYGqK++++s++ rsYYrCt++ +C+++k v++++++++ + +++Y +H+++
Sevir.3G084500.1.p 96 YDGHQWRKYGQKNITNSKHQRSYYRCTYKheqNCMATKTVQQQEHNTTetvMYTVVYYAHHTCK 159
59**************************9999********998766542227899******997 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 244 aa
Download sequence Send
to blast |
MKLHTRYLPQ ASSTCADESE CFACDHQPAI NEIEKVQALV AQLRAIILPE YEMIPDLRLE 60 LVSQLFGSLQ DCASKAILEL WRYGESTSYM TPVPHYDGHQ WRKYGQKNIT NSKHQRSYYR 120 CTYKHEQNCM ATKTVQQQEH NTTETVMYTV VYYAHHTCKA NTGPALPHVI ETSTPQSAMS 180 PDRIIASQET VSPHTGSHKI LENGHATQQL TEDMQVLLKK IACAPLDSDI WEMDAILCRI 240 NAC*
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